Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:7303340-7533459

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12953 3 7366282 to 7366948 666 CpG island CpG island 12953
Tssr28292 3 7366589 to 7366594 5 + TSS region transcription start site region 28292
Tssr28293 3 7366598 to 7366641 43 + TSS region transcription start site region 28293
Tssr814 3 7366657 to 7366666 9 + TSS region transcription start site region 814
Pkia 3 7366669 to 7445366 78697 + protein coding gene protein kinase inhibitor, alpha
Tssr28294 3 7366673 to 7366694 21 + TSS region transcription start site region 28294
Tssr28295 3 7366702 to 7366713 11 + TSS region transcription start site region 28295
Tssr28296 3 7390092 to 7390096 4 + TSS region transcription start site region 28296
Tssr28297 3 7407355 to 7407369 14 + TSS region transcription start site region 28297
Gm37918 3 7418340 to 7418459 119 - pseudogene predicted gene, 37918
D3Mit327 3 7422168 to 7422315 147 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 327
Tssr28298 3 7429048 to 7429062 14 + TSS region transcription start site region 28298
Tssr28299 3 7442762 to 7442776 14 + TSS region transcription start site region 28299
Gm8826 3 7454521 to 7455521 1000 + pseudogene predicted gene 8826
Tssr28300 3 7501522 to 7501535 13 + TSS region transcription start site region 28300
Gm23592 3 7501904 to 7502020 116 - snoRNA gene predicted gene, 23592
Cpgi12954 3 7503035 to 7504159 1124 CpG island CpG island 12954
Tssr28301 3 7503423 to 7503503 80 + TSS region transcription start site region 28301
Zc2hc1a 3 7503483 to 7553836 50353 + protein coding gene zinc finger, C2HC-type containing 1A
D3Mit164 3 7521114 to 7521248 134 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 164
Cplaq8 3 7521114 to 7891638 370524 QTL circadian period of locomotor activity 8
Hivan1 3 68809613 to 7521114 -61288499 QTL HIV-associated nephropathy 1
Aec1 3 102782718 to 7521114 -95261604 QTL autoimmune exocrinopathy 1