Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:69607647-70407656

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37380 3 69661766 to 69662162 396 + pseudogene predicted gene, 37380
Tssr33556 3 69673572 to 69673580 8 - TSS region transcription start site region 33556
Gm25621 3 69685467 to 69685580 113 + rRNA gene predicted gene, 25621
Rpl32-ps 3 69716941 to 69717444 503 - pseudogene ribosomal protein L32, pseudogene
Tshp4 3 69718176 to 69718412 236 QTL tooth shape 4
D3Mit22 3 69718176 to 69718412 236 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 22
Skull4 3 69718176 to 69718412 236 QTL skull morphology 4
Manln3 3 69718176 to 69718412 236 QTL mandible length 3
Cpgi13262 3 69721713 to 69722888 1175 CpG island CpG island 13262
Tssr29546 3 69721996 to 69722071 75 + TSS region transcription start site region 29546
Nmd3 3 69722055 to 69749047 26992 + protein coding gene NMD3 ribosome export adaptor
Tssr29547 3 69722089 to 69722101 12 + TSS region transcription start site region 29547
Tssr29548 3 69740163 to 69740167 4 + TSS region transcription start site region 29548
9530051E23Rik 3 69753113 to 69756372 3259 unclassified gene RIKEN cDNA 9530051E23 gene
Gm19055 3 69808464 to 69809024 560 - pseudogene predicted gene, 19055
Sptssb 3 69819538 to 69859894 40356 - protein coding gene serine palmitoyltransferase, small subunit B
Tssr33557 3 69858870 to 69858874 4 - TSS region transcription start site region 33557
Tssr903 3 69859855 to 69859864 9 - TSS region transcription start site region 903
Tssr33558 3 69859875 to 69859901 26 - TSS region transcription start site region 33558
Cpgi13263 3 69860207 to 69861421 1214 CpG island CpG island 13263
Tssr33559 3 69861374 to 69861395 21 - TSS region transcription start site region 33559
Gm35817 3 69882471 to 69884114 1643 + lncRNA gene predicted gene, 35817
D3Mit277 3 69903428 to 69903525 97 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 277
Gm17895 3 69954809 to 69955682 873 - pseudogene predicted gene, 17895
Gm23484 3 69962315 to 69962445 130 - snoRNA gene predicted gene, 23484
Tssr29549 3 69963152 to 69963160 8 + TSS region transcription start site region 29549
Gm37784 3 69963282 to 69963470 188 + pseudogene predicted gene, 37784
Otol1 3 70007613 to 70028708 21095 + protein coding gene otolin 1
Tssr29550 3 70007640 to 70007644 4 + TSS region transcription start site region 29550
Tssr29551 3 70007647 to 70007656 9 + TSS region transcription start site region 29551
Tssr29552 3 70007668 to 70007679 11 + TSS region transcription start site region 29552
Tssr29553 3 70007684 to 70007694 10 + TSS region transcription start site region 29553
Nhdlq17 3 70015850 to 70015850 0 QTL non-HDL QTL 17
Tssr904 3 70040495 to 70040498 3 + TSS region transcription start site region 904
Gm37681 3 70059745 to 70060471 726 + pseudogene predicted gene, 37681
Gm37585 3 70116253 to 70116532 279 - pseudogene predicted gene, 37585
Gm23477 3 70228747 to 70228874 127 - snoRNA gene predicted gene, 23477
Char4 3 100747974 to 69718176 -31029798 QTL P. chabaudi malaria resistance QTL 4