Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:69580163-69900167

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
B3galnt1 3 69574158 to 69598960 24802 - protein coding gene UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1
Tssr33545 3 69588069 to 69588080 11 - TSS region transcription start site region 33545
Tssr33546 3 69596242 to 69596246 4 - TSS region transcription start site region 33546
Tssr33547 3 69596272 to 69596279 7 - TSS region transcription start site region 33547
Tssr33548 3 69596291 to 69596294 3 - TSS region transcription start site region 33548
Cpgi13261 3 69598107 to 69599446 1339 CpG island CpG island 13261
Tssr33549 3 69598822 to 69598874 52 - TSS region transcription start site region 33549
Tssr33550 3 69598876 to 69598929 53 - TSS region transcription start site region 33550
Tssr33551 3 69598930 to 69598943 13 - TSS region transcription start site region 33551
Tssr33552 3 69598960 to 69599003 43 - TSS region transcription start site region 33552
Tssr33553 3 69599185 to 69599202 17 - TSS region transcription start site region 33553
Tssr33554 3 69599212 to 69599231 19 - TSS region transcription start site region 33554
Tssr33555 3 69599248 to 69599281 33 - TSS region transcription start site region 33555
Gm37380 3 69661766 to 69662162 396 + pseudogene predicted gene, 37380
Tssr33556 3 69673572 to 69673580 8 - TSS region transcription start site region 33556
Gm25621 3 69685467 to 69685580 113 + rRNA gene predicted gene, 25621
Rpl32-ps 3 69716941 to 69717444 503 - pseudogene ribosomal protein L32, pseudogene
Skull4 3 69718176 to 69718412 236 QTL skull morphology 4
Manln3 3 69718176 to 69718412 236 QTL mandible length 3
Tshp4 3 69718176 to 69718412 236 QTL tooth shape 4
D3Mit22 3 69718176 to 69718412 236 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 22
Cpgi13262 3 69721713 to 69722888 1175 CpG island CpG island 13262
Tssr29546 3 69721996 to 69722071 75 + TSS region transcription start site region 29546
Nmd3 3 69722055 to 69749047 26992 + protein coding gene NMD3 ribosome export adaptor
Tssr29547 3 69722089 to 69722101 12 + TSS region transcription start site region 29547
Tssr29548 3 69740163 to 69740167 4 + TSS region transcription start site region 29548
9530051E23Rik 3 69753113 to 69756372 3259 unclassified gene RIKEN cDNA 9530051E23 gene
Gm19055 3 69808464 to 69809024 560 - pseudogene predicted gene, 19055
Sptssb 3 69819538 to 69859894 40356 - protein coding gene serine palmitoyltransferase, small subunit B
Tssr33557 3 69858870 to 69858874 4 - TSS region transcription start site region 33557
Tssr903 3 69859855 to 69859864 9 - TSS region transcription start site region 903
Tssr33558 3 69859875 to 69859901 26 - TSS region transcription start site region 33558
Cpgi13263 3 69860207 to 69861421 1214 CpG island CpG island 13263
Tssr33559 3 69861374 to 69861395 21 - TSS region transcription start site region 33559
Gm35817 3 69882471 to 69884114 1643 + lncRNA gene predicted gene, 35817
Char4 3 100747974 to 69718176 -31029798 QTL P. chabaudi malaria resistance QTL 4