Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:69271918-69605798

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13259 3 69289884 to 69290090 206 CpG island CpG island 13259
Tssr33542 3 69289935 to 69289971 36 - TSS region transcription start site region 33542
Cpgi13260 3 69316236 to 69318551 2315 CpG island CpG island 13260
Tssr33543 3 69316441 to 69316467 26 - TSS region transcription start site region 33543
Tssr29535 3 69316857 to 69316869 12 + TSS region transcription start site region 29535
Tssr29536 3 69316873 to 69316937 64 + TSS region transcription start site region 29536
Ppm1l 3 69316918 to 69560798 243880 + protein coding gene protein phosphatase 1 (formerly 2C)-like
1700037N05Rik 3 69318158 to 69319287 1129 unclassified gene RIKEN cDNA 1700037N05 gene
Tssr33544 3 69319256 to 69319293 37 - TSS region transcription start site region 33544
Gm17214 3 69320045 to 69320585 540 - pseudogene predicted gene 17214
Gm17212 3 69335502 to 69335760 258 - pseudogene predicted gene 17212
Tssr29537 3 69340489 to 69340493 4 + TSS region transcription start site region 29537
Tssr29538 3 69343878 to 69343889 11 + TSS region transcription start site region 29538
Tssr29539 3 69343999 to 69344016 17 + TSS region transcription start site region 29539
Tssr29540 3 69344157 to 69344172 15 + TSS region transcription start site region 29540
Tssr29541 3 69373729 to 69373774 45 + TSS region transcription start site region 29541
A330078L11Rik 3 69376398 to 69383696 7298 unclassified gene RIKEN cDNA A330078L11 gene
Tssr29542 3 69386396 to 69386402 6 + TSS region transcription start site region 29542
Tssr29543 3 69397309 to 69397312 3 + TSS region transcription start site region 29543
Gm17213 3 69431205 to 69432381 1176 - pseudogene predicted gene 17213
Tssr29544 3 69548950 to 69548976 26 + TSS region transcription start site region 29544
Tssr29545 3 69553354 to 69553372 18 + TSS region transcription start site region 29545
Gm8565 3 69566451 to 69567464 1013 - pseudogene predicted gene 8565
B3galnt1 3 69574158 to 69598960 24802 - protein coding gene UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1
Tssr33545 3 69588069 to 69588080 11 - TSS region transcription start site region 33545
Tssr33546 3 69596242 to 69596246 4 - TSS region transcription start site region 33546
Tssr33547 3 69596272 to 69596279 7 - TSS region transcription start site region 33547
Tssr33548 3 69596291 to 69596294 3 - TSS region transcription start site region 33548
Cpgi13261 3 69598107 to 69599446 1339 CpG island CpG island 13261
Tssr33549 3 69598822 to 69598874 52 - TSS region transcription start site region 33549
Tssr33550 3 69598876 to 69598929 53 - TSS region transcription start site region 33550
Tssr33551 3 69598930 to 69598943 13 - TSS region transcription start site region 33551
Tssr33552 3 69598960 to 69599003 43 - TSS region transcription start site region 33552
Tssr33553 3 69599185 to 69599202 17 - TSS region transcription start site region 33553
Tssr33554 3 69599212 to 69599231 19 - TSS region transcription start site region 33554
Tssr33555 3 69599248 to 69599281 33 - TSS region transcription start site region 33555