MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:69025076-69065087

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smc4	3	69004972 to 69034623	29651	+	protein coding gene	structural maintenance of chromosomes 4
Tssr29523	3	69026112 to 69026115	3	+	TSS region	transcription start site region 29523
Tssr29524	3	69027678 to 69027685	7	+	TSS region	transcription start site region 29524
Tssr29525	3	69028522 to 69028533	11	+	TSS region	transcription start site region 29525
Tssr29526	3	69029395 to 69029414	19	+	TSS region	transcription start site region 29526
Tssr29527	3	69029446 to 69029466	20	+	TSS region	transcription start site region 29527
Tssr29528	3	69030246 to 69030303	57	+	TSS region	transcription start site region 29528
Trim59	3	69035288 to 69044755	9467	-	protein coding gene	tripartite motif-containing 59
Cpgi13256	3	69044061 to 69045524	1463		CpG island	CpG island 13256
Tssr33523	3	69044650 to 69044659	9	-	TSS region	transcription start site region 33523
Tssr33524	3	69044660 to 69044667	7	-	TSS region	transcription start site region 33524
Tssr33525	3	69044697 to 69044763	66	-	TSS region	transcription start site region 33525
Tssr33526	3	69044963 to 69044974	11	-	TSS region	transcription start site region 33526
Tssr33527	3	69044985 to 69044999	14	-	TSS region	transcription start site region 33527
Tssr29529	3	69045076 to 69045087	11	+	TSS region	transcription start site region 29529
Tssr29530	3	69045118 to 69045136	18	+	TSS region	transcription start site region 29530
Cpgi13257	3	69051524 to 69051978	454		CpG island	CpG island 13257
9630025H16Rik	3	69060646 to 69065250	4604	+	lncRNA gene	RIKEN cDNA 9630025H16 gene