Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:69005246-69055303

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13255 3 69004450 to 69006487 2037 CpG island CpG island 13255
Smc4 3 69004972 to 69034623 29651 + protein coding gene structural maintenance of chromosomes 4
Tssr29509 3 69005299 to 69005313 14 + TSS region transcription start site region 29509
Tssr29510 3 69005337 to 69005354 17 + TSS region transcription start site region 29510
Tssr29511 3 69005440 to 69005485 45 + TSS region transcription start site region 29511
Tssr29512 3 69005733 to 69005742 9 + TSS region transcription start site region 29512
Tssr29513 3 69005927 to 69005946 19 + TSS region transcription start site region 29513
Tssr29514 3 69006032 to 69006072 40 + TSS region transcription start site region 29514
Tssr33522 3 69006423 to 69006429 6 - TSS region transcription start site region 33522
Tssr29515 3 69009482 to 69009496 14 + TSS region transcription start site region 29515
Tssr29516 3 69009520 to 69009607 87 + TSS region transcription start site region 29516
Mir15b 3 69009772 to 69009835 63 + miRNA gene microRNA 15b
Mirc10 3 69009772 to 69009996 224 complex/cluster/region microRNA cluster 10, including Mir15b through Mir16-2
Mir16-2 3 69009902 to 69009996 94 + miRNA gene microRNA 16-2
Tssr29517 3 69009981 to 69009986 5 + TSS region transcription start site region 29517
Tssr29518 3 69016087 to 69016108 21 + TSS region transcription start site region 29518
Tssr29519 3 69016674 to 69016686 12 + TSS region transcription start site region 29519
Tssr29520 3 69016692 to 69016707 15 + TSS region transcription start site region 29520
Tssr29521 3 69019251 to 69019263 12 + TSS region transcription start site region 29521
Tssr29522 3 69024281 to 69024285 4 + TSS region transcription start site region 29522
Tssr29523 3 69026112 to 69026115 3 + TSS region transcription start site region 29523
Tssr29524 3 69027678 to 69027685 7 + TSS region transcription start site region 29524
Tssr29525 3 69028522 to 69028533 11 + TSS region transcription start site region 29525
Tssr29526 3 69029395 to 69029414 19 + TSS region transcription start site region 29526
Tssr29527 3 69029446 to 69029466 20 + TSS region transcription start site region 29527
Tssr29528 3 69030246 to 69030303 57 + TSS region transcription start site region 29528
Trim59 3 69035288 to 69044755 9467 - protein coding gene tripartite motif-containing 59
Cpgi13256 3 69044061 to 69045524 1463 CpG island CpG island 13256
Tssr33523 3 69044650 to 69044659 9 - TSS region transcription start site region 33523
Tssr33524 3 69044660 to 69044667 7 - TSS region transcription start site region 33524
Tssr33525 3 69044697 to 69044763 66 - TSS region transcription start site region 33525
Tssr33526 3 69044963 to 69044974 11 - TSS region transcription start site region 33526
Tssr33527 3 69044985 to 69044999 14 - TSS region transcription start site region 33527
Tssr29529 3 69045076 to 69045087 11 + TSS region transcription start site region 29529
Tssr29530 3 69045118 to 69045136 18 + TSS region transcription start site region 29530
Cpgi13257 3 69051524 to 69051978 454 CpG island CpG island 13257