Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:68862499-69034570

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17641 3 68867917 to 68870266 2349 - protein coding gene predicted gene, 17641
Tssr29501 3 68868805 to 68868813 8 + TSS region transcription start site region 29501
Cpgi13254 3 68869078 to 68870992 1914 CpG island CpG island 13254
Tssr29502 3 68869307 to 68869322 15 + TSS region transcription start site region 29502
Tssr29503 3 68869337 to 68869399 62 + TSS region transcription start site region 29503
Tssr29504 3 68869563 to 68869589 26 + TSS region transcription start site region 29504
1110032F04Rik 3 68869586 to 68872163 2577 + protein coding gene RIKEN cDNA 1110032F04 gene
Tssr29505 3 68869646 to 68869659 13 + TSS region transcription start site region 29505
Ift80 3 68892499 to 69004570 112071 - protein coding gene intraflagellar transport 80
Tssr33513 3 68893077 to 68893083 6 - TSS region transcription start site region 33513
Gm20689 3 68900171 to 68900449 278 - pseudogene predicted gene 20689
Gm20690 3 68901830 to 68902144 314 + pseudogene predicted gene 20690
Gm18588 3 68902267 to 68902758 491 - pseudogene predicted gene, 18588
Tssr33514 3 68902776 to 68902797 21 - TSS region transcription start site region 33514
Gm20691 3 68903820 to 68904152 332 - pseudogene predicted gene 20691
Gm48183 3 68916499 to 68917323 824 - unclassified gene predicted gene, 48183
Tssr33515 3 68990973 to 68990976 3 - TSS region transcription start site region 33515
Tssr33516 3 69004365 to 69004378 13 - TSS region transcription start site region 33516
Tssr901 3 69004412 to 69004413 1 - TSS region transcription start site region 901
Cpgi13255 3 69004450 to 69006487 2037 CpG island CpG island 13255
Tssr33517 3 69004452 to 69004467 15 - TSS region transcription start site region 33517
Tssr33518 3 69004475 to 69004499 24 - TSS region transcription start site region 33518
Tssr33519 3 69004503 to 69004545 42 - TSS region transcription start site region 33519
Tssr33520 3 69004553 to 69004564 11 - TSS region transcription start site region 33520
Tssr33521 3 69004565 to 69004585 20 - TSS region transcription start site region 33521
Tssr29506 3 69004711 to 69004731 20 + TSS region transcription start site region 29506
Tssr29507 3 69004969 to 69005021 52 + TSS region transcription start site region 29507
Smc4 3 69004972 to 69034623 29651 + protein coding gene structural maintenance of chromosomes 4
Tssr29508 3 69005118 to 69005142 24 + TSS region transcription start site region 29508
Tssr29509 3 69005299 to 69005313 14 + TSS region transcription start site region 29509
Tssr29510 3 69005337 to 69005354 17 + TSS region transcription start site region 29510
Tssr29511 3 69005440 to 69005485 45 + TSS region transcription start site region 29511
Tssr29512 3 69005733 to 69005742 9 + TSS region transcription start site region 29512
Tssr29513 3 69005927 to 69005946 19 + TSS region transcription start site region 29513
Tssr29514 3 69006032 to 69006072 40 + TSS region transcription start site region 29514
Tssr33522 3 69006423 to 69006429 6 - TSS region transcription start site region 33522
Tssr29515 3 69009482 to 69009496 14 + TSS region transcription start site region 29515
Tssr29516 3 69009520 to 69009607 87 + TSS region transcription start site region 29516
Mirc10 3 69009772 to 69009996 224 complex/cluster/region microRNA cluster 10, including Mir15b through Mir16-2
Mir15b 3 69009772 to 69009835 63 + miRNA gene microRNA 15b
Mir16-2 3 69009902 to 69009996 94 + miRNA gene microRNA 16-2
Tssr29517 3 69009981 to 69009986 5 + TSS region transcription start site region 29517
Tssr29518 3 69016087 to 69016108 21 + TSS region transcription start site region 29518
Tssr29519 3 69016674 to 69016686 12 + TSS region transcription start site region 29519
Tssr29520 3 69016692 to 69016707 15 + TSS region transcription start site region 29520
Tssr29521 3 69019251 to 69019263 12 + TSS region transcription start site region 29521
Tssr29522 3 69024281 to 69024285 4 + TSS region transcription start site region 29522
Tssr29523 3 69026112 to 69026115 3 + TSS region transcription start site region 29523
Tssr29524 3 69027678 to 69027685 7 + TSS region transcription start site region 29524
Tssr29525 3 69028522 to 69028533 11 + TSS region transcription start site region 29525
Tssr29526 3 69029395 to 69029414 19 + TSS region transcription start site region 29526
Tssr29527 3 69029446 to 69029466 20 + TSS region transcription start site region 29527
Tssr29528 3 69030246 to 69030303 57 + TSS region transcription start site region 29528