Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:67473600-68035654

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfm1 3 67430115 to 67475068 44953 + protein coding gene G elongation factor, mitochondrial 1
Tssr29442 3 67473656 to 67473659 3 + TSS region transcription start site region 29442
Gm42568 3 67476978 to 67478818 1840 + unclassified gene predicted gene 42568
Rarres1 3 67478972 to 67515523 36551 - protein coding gene retinoic acid receptor responder (tazarotene induced) 1
Tssr29443 3 67504208 to 67504219 11 + TSS region transcription start site region 29443
Cpgi13247 3 67514701 to 67515881 1180 CpG island CpG island 13247
Tssr33502 3 67515468 to 67515484 16 - TSS region transcription start site region 33502
Tssr33503 3 67515487 to 67515502 15 - TSS region transcription start site region 33503
Tssr33504 3 67515626 to 67515654 28 - TSS region transcription start site region 33504
Tssr33505 3 67515663 to 67515700 37 - TSS region transcription start site region 33505
Gm40067 3 67515667 to 67519663 3996 + lncRNA gene predicted gene, 40067
Tssr33506 3 67515704 to 67515737 33 - TSS region transcription start site region 33506
Gm35299 3 67551329 to 67553425 2096 - lincRNA gene predicted gene, 35299
Cpgi13248 3 67557415 to 67557667 252 CpG island CpG island 13248
Tssr29444 3 67557523 to 67557534 11 + TSS region transcription start site region 29444
4930402C01Rik 3 67570565 to 67572821 2256 - lincRNA gene RIKEN cDNA 4930402C01 gene
Gm25919 3 67573160 to 67573291 131 - snoRNA gene predicted gene, 25919
Cpgi13249 3 67582453 to 67583250 797 CpG island CpG island 13249
Tssr29445 3 67582726 to 67582729 3 + TSS region transcription start site region 29445
Tssr29446 3 67582737 to 67582768 31 + TSS region transcription start site region 29446
Mfsd1 3 67582768 to 67604231 21463 + protein coding gene major facilitator superfamily domain containing 1
Tssr29447 3 67582770 to 67582816 46 + TSS region transcription start site region 29447
Tssr29448 3 67582878 to 67582898 20 + TSS region transcription start site region 29448
Tssr29449 3 67603204 to 67603216 12 + TSS region transcription start site region 29449
Gm8515 3 67607206 to 67607781 575 - pseudogene predicted gene 8515
Gm412 3 67619781 to 67620698 917 - pseudogene predicted gene 412
Gm37601 3 67684359 to 67684752 393 - pseudogene predicted gene, 37601
Gm18717 3 67742057 to 67743297 1240 - pseudogene predicted gene, 18717
Gm35407 3 67753600 to 67755654 2054 + lncRNA gene predicted gene, 35407
Gm40068 3 67755659 to 67766285 10626 + lncRNA gene predicted gene, 40068
Tssr29450 3 67892128 to 67892155 27 + TSS region transcription start site region 29450
Tssr29451 3 67892189 to 67892226 37 + TSS region transcription start site region 29451
Iqcj 3 67892220 to 68056593 164373 + protein coding gene IQ motif containing J
Iqschfp 3 67892232 to 68626466 734234 + protein coding gene Iqcj and Schip1 fusion protein