Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:67378972-67615523

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mlf1	3	67374097 to 67400000	25903	+	protein coding gene	myeloid leukemia factor 1
Cpgi13245	3	67429946 to 67430633	687		CpG island	CpG island 13245
Tssr29439	3	67430101 to 67430184	83	+	TSS region	transcription start site region 29439
Gfm1	3	67430115 to 67475068	44953	+	protein coding gene	G elongation factor, mitochondrial 1
Lxn	3	67457999 to 67463907	5908	-	protein coding gene	latexin
Cpgi13246	3	67463577 to 67464145	568		CpG island	CpG island 13246
Tssr33497	3	67463616 to 67463627	11	-	TSS region	transcription start site region 33497
Tssr33498	3	67463780 to 67463791	11	-	TSS region	transcription start site region 33498
Tssr33499	3	67463798 to 67463825	27	-	TSS region	transcription start site region 33499
Tssr33500	3	67463828 to 67463943	115	-	TSS region	transcription start site region 33500
Tssr33501	3	67464134 to 67464167	33	-	TSS region	transcription start site region 33501
Tssr29440	3	67472849 to 67472855	6	+	TSS region	transcription start site region 29440
Tssr29441	3	67473446 to 67473455	9	+	TSS region	transcription start site region 29441
Tssr29442	3	67473656 to 67473659	3	+	TSS region	transcription start site region 29442
Gm42568	3	67476978 to 67478818	1840	+	unclassified gene	predicted gene 42568
Rarres1	3	67478972 to 67515523	36551	-	protein coding gene	retinoic acid receptor responder (tazarotene induced) 1
Tssr29443	3	67504208 to 67504219	11	+	TSS region	transcription start site region 29443
Cpgi13247	3	67514701 to 67515881	1180		CpG island	CpG island 13247
Tssr33502	3	67515468 to 67515484	16	-	TSS region	transcription start site region 33502
Tssr33503	3	67515487 to 67515502	15	-	TSS region	transcription start site region 33503
Tssr33504	3	67515626 to 67515654	28	-	TSS region	transcription start site region 33504
Tssr33505	3	67515663 to 67515700	37	-	TSS region	transcription start site region 33505
Gm40067	3	67515667 to 67519663	3996	+	lncRNA gene	predicted gene, 40067
Tssr33506	3	67515704 to 67515737	33	-	TSS region	transcription start site region 33506
Gm35299	3	67551329 to 67553425	2096	-	lincRNA gene	predicted gene, 35299
Cpgi13248	3	67557415 to 67557667	252		CpG island	CpG island 13248
Tssr29444	3	67557523 to 67557534	11	+	TSS region	transcription start site region 29444
4930402C01Rik	3	67570565 to 67572821	2256	-	lincRNA gene	RIKEN cDNA 4930402C01 gene
Gm25919	3	67573160 to 67573291	131	-	snoRNA gene	predicted gene, 25919
Cpgi13249	3	67582453 to 67583250	797		CpG island	CpG island 13249
Tssr29445	3	67582726 to 67582729	3	+	TSS region	transcription start site region 29445
Tssr29446	3	67582737 to 67582768	31	+	TSS region	transcription start site region 29446
Mfsd1	3	67582768 to 67604231	21463	+	protein coding gene	major facilitator superfamily domain containing 1
Tssr29447	3	67582770 to 67582816	46	+	TSS region	transcription start site region 29447
Tssr29448	3	67582878 to 67582898	20	+	TSS region	transcription start site region 29448
Tssr29449	3	67603204 to 67603216	12	+	TSS region	transcription start site region 29449
Gm8515	3	67607206 to 67607781	575	-	pseudogene	predicted gene 8515