Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:66586279-67376304

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Nds29 3 66587578 to 66587695 117 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 29
D3Mit241 3 66587584 to 66587697 113 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 241
Hdl5 3 66587584 to 66587697 113 QTL HDL level 5
Susp 3 66587584 to 66587697 113 QTL suppressor of superoxide production
Gm6555 3 66882350 to 66883138 788 + pseudogene predicted gene 6555
D3Mit71 3 66891236 to 66891364 128 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 71
Gm38356 3 66907359 to 66907766 407 - pseudogene predicted gene, 38356
Gm43516 3 66953541 to 66953862 321 + pseudogene predicted gene 43516
Cpgi13238 3 66970441 to 66970958 517 CpG island CpG island 13238
Shox2 3 66971727 to 66981771 10044 - protein coding gene short stature homeobox 2
Cpgi13239 3 66973300 to 66974263 963 CpG island CpG island 13239
Tssr33491 3 66973780 to 66973827 47 - TSS region transcription start site region 33491
Cpgi13240 3 66978173 to 66979254 1081 CpG island CpG island 13240
Cpgi13241 3 66980747 to 66981630 883 CpG island CpG island 13241
Tssr33492 3 66981259 to 66981277 18 - TSS region transcription start site region 33492
Tssr33493 3 66981279 to 66981304 25 - TSS region transcription start site region 33493
Tssr29428 3 66981352 to 66981407 55 + TSS region transcription start site region 29428
Rsrc1 3 66981398 to 67358403 377005 + protein coding gene arginine/serine-rich coiled-coil 1
Tssr33494 3 66981589 to 66981612 23 - TSS region transcription start site region 33494
Tssr33495 3 66981741 to 66981788 47 - TSS region transcription start site region 33495
Tssr33496 3 66981935 to 66981951 16 - TSS region transcription start site region 33496
Cpgi13242 3 66982272 to 66982832 560 CpG island CpG island 13242
Cpgi13243 3 66985503 to 66986255 752 CpG island CpG island 13243
Tssr29429 3 66985647 to 66985678 31 + TSS region transcription start site region 29429
Tssr29430 3 66985680 to 66985692 12 + TSS region transcription start site region 29430
Tssr29431 3 66985700 to 66985740 40 + TSS region transcription start site region 29431
Tssr29432 3 66985947 to 66985986 39 + TSS region transcription start site region 29432
Tssr897 3 67012212 to 67012214 2 + TSS region transcription start site region 897
D3Mit70 3 67017499 to 67017710 211 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 70
Gm22295 3 67055958 to 67056064 106 + snRNA gene predicted gene, 22295
Tssr29433 3 67092500 to 67092504 4 + TSS region transcription start site region 29433
Tssr29434 3 67092572 to 67092582 10 + TSS region transcription start site region 29434
Tssr29435 3 67159155 to 67159160 5 + TSS region transcription start site region 29435
Gm17402 3 67365461 to 67375163 9702 - protein coding gene predicted gene, 17402
Cpgi13244 3 67373929 to 67374710 781 CpG island CpG island 13244
Tssr29436 3 67374091 to 67374102 11 + TSS region transcription start site region 29436
Mlf1 3 67374097 to 67400000 25903 + protein coding gene myeloid leukemia factor 1
Tssr29437 3 67374116 to 67374154 38 + TSS region transcription start site region 29437
Tssr29438 3 67374173 to 67374185 12 + TSS region transcription start site region 29438