Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:66207578-66967695

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Veph1 3 66053558 to 66296837 243279 - protein coding gene ventricular zone expressed PH domain-containing 1
Tssr29422 3 66219909 to 66219927 18 + TSS region transcription start site region 29422
Ptx3 3 66219910 to 66225805 5895 + protein coding gene pentraxin related gene
Tssr29423 3 66219942 to 66219951 9 + TSS region transcription start site region 29423
Tssr29424 3 66219960 to 66219965 5 + TSS region transcription start site region 29424
Tssr29425 3 66219969 to 66219988 19 + TSS region transcription start site region 29425
Cpgi13236 3 66220497 to 66221226 729 CpG island CpG island 13236
Tssr29426 3 66225518 to 66225520 2 + TSS region transcription start site region 29426
Tssr33487 3 66253682 to 66253694 12 - TSS region transcription start site region 33487
Cpgi13237 3 66292441 to 66292705 264 CpG island CpG island 13237
Tssr33488 3 66296707 to 66296762 55 - TSS region transcription start site region 33488
Tssr33489 3 66296807 to 66296822 15 - TSS region transcription start site region 33489
Tssr33490 3 66296918 to 66296930 12 - TSS region transcription start site region 33490
Gm50014 3 66364539 to 66364626 87 + pseudogene predicted gene, 50014
Gm35184 3 66374299 to 66388105 13806 + lncRNA gene predicted gene, 35184
Gm35236 3 66400407 to 66406066 5659 + lncRNA gene predicted gene, 35236
Tssr29427 3 66401147 to 66401161 14 + TSS region transcription start site region 29427
Ath23 3 66450160 to 66450160 0 QTL atherosclerosis 23
Gm17952 3 66562805 to 66563551 746 - pseudogene predicted gene, 17952
D3Nds29 3 66587578 to 66587695 117 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 29
D3Mit241 3 66587584 to 66587697 113 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 241
Hdl5 3 66587584 to 66587697 113 QTL HDL level 5
Susp 3 66587584 to 66587697 113 QTL suppressor of superoxide production
Gm6555 3 66882350 to 66883138 788 + pseudogene predicted gene 6555
D3Mit71 3 66891236 to 66891364 128 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 71
Gm38356 3 66907359 to 66907766 407 - pseudogene predicted gene, 38356
Gm43516 3 66953541 to 66953862 321 + pseudogene predicted gene 43516