Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:65402483-65654414

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34576 3 65449410 to 65479809 30399 + lncRNA gene predicted gene, 34576
Tssr29400 3 65449534 to 65449539 5 + TSS region transcription start site region 29400
Tssr29401 3 65449543 to 65449553 10 + TSS region transcription start site region 29401
Tssr894 3 65473350 to 65473351 1 + TSS region transcription start site region 894
Gm34780 3 65494087 to 65495035 948 - lncRNA gene predicted gene, 34780
Gm40066 3 65495168 to 65517292 22124 + lncRNA gene predicted gene, 40066
Gm37009 3 65506277 to 65506637 360 - pseudogene predicted gene, 37009
Gm38503 3 65506457 to 65520039 13582 - lncRNA gene predicted gene, 38503
Tssr895 3 65515499 to 65515501 2 + TSS region transcription start site region 895
Tssr29402 3 65516121 to 65516136 15 + TSS region transcription start site region 29402
Gm22279 3 65525701 to 65525793 92 + snRNA gene predicted gene, 22279
4931440P22Rik 3 65527483 to 65529414 1931 - lncRNA gene RIKEN cDNA 4931440P22 gene
Cpgi13230 3 65527655 to 65529797 2142 CpG island CpG island 13230
Tssr29403 3 65527801 to 65527844 43 + TSS region transcription start site region 29403
Tssr29404 3 65528001 to 65528021 20 + TSS region transcription start site region 29404
Tssr29405 3 65528404 to 65528431 27 + TSS region transcription start site region 29405
Tssr29406 3 65528434 to 65528454 20 + TSS region transcription start site region 29406
Tiparp 3 65528447 to 65555518 27071 + protein coding gene TCDD-inducible poly(ADP-ribose) polymerase
Tssr29407 3 65528457 to 65528471 14 + TSS region transcription start site region 29407
Tssr33466 3 65529355 to 65529384 29 - TSS region transcription start site region 33466
Tssr29408 3 65531246 to 65531260 14 + TSS region transcription start site region 29408
Tssr29409 3 65531665 to 65531695 30 + TSS region transcription start site region 29409
Gm34924 3 65575219 to 65580850 5631 - lncRNA gene predicted gene, 34924
Cpgi13231 3 65586435 to 65586699 264 CpG island CpG island 13231
Tssr896 3 65613493 to 65613494 1 + TSS region transcription start site region 896
Gm5847 3 65613589 to 65615183 1594 + pseudogene predicted gene 5847
Gm38233 3 65615368 to 65616174 806 - pseudogene predicted gene, 38233
Tssr33467 3 65639278 to 65639303 25 - TSS region transcription start site region 33467