Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:65018060-65417685

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38048 3 64949223 to 65223701 274478 + sense overlapping lncRNA gene predicted gene, 38048
Tssr892 3 65108899 to 65108911 12 + TSS region transcription start site region 892
Tssr29390 3 65108968 to 65108987 19 + TSS region transcription start site region 29390
Tssr29391 3 65108996 to 65109037 41 + TSS region transcription start site region 29391
Tssr29392 3 65109043 to 65109089 46 + TSS region transcription start site region 29392
Cpgi13225 3 65109152 to 65109373 221 CpG island CpG island 13225
Tssr29393 3 65109269 to 65109287 18 + TSS region transcription start site region 29393
Tssr29394 3 65109329 to 65109340 11 + TSS region transcription start site region 29394
Tssr29395 3 65109343 to 65109420 77 + TSS region transcription start site region 29395
Kcnab1 3 65109384 to 65378223 268839 + protein coding gene potassium voltage-gated channel, shaker-related subfamily, beta member 1
Tssr29396 3 65109471 to 65109486 15 + TSS region transcription start site region 29396
Tssr29397 3 65109499 to 65109534 35 + TSS region transcription start site region 29397
Cpgi13226 3 65109794 to 65109992 198 CpG island CpG island 13226
A330015K06Rik 3 65133060 to 65302685 169625 - antisense lncRNA gene RIKEN cDNA A330015K06 gene
Tssr29398 3 65188112 to 65188143 31 + TSS region transcription start site region 29398
Tssr33453 3 65200565 to 65200566 1 - TSS region transcription start site region 33453
Tssr33454 3 65295893 to 65295905 12 - TSS region transcription start site region 33454
Tssr33455 3 65295907 to 65295918 11 - TSS region transcription start site region 33455
Tssr33456 3 65302651 to 65302662 11 - TSS region transcription start site region 33456
Tssr33457 3 65302755 to 65302765 10 - TSS region transcription start site region 33457
A730090N16Rik 3 65324776 to 65349429 24653 - antisense lncRNA gene RIKEN cDNA A730090N16 gene
Tssr29399 3 65339539 to 65339542 3 + TSS region transcription start site region 29399
Ssr3 3 65379657 to 65392553 12896 - protein coding gene signal sequence receptor, gamma
Tssr33458 3 65380307 to 65380321 14 - TSS region transcription start site region 33458
Tssr33459 3 65380782 to 65380793 11 - TSS region transcription start site region 33459
Tssr33460 3 65380931 to 65380948 17 - TSS region transcription start site region 33460
Tssr33461 3 65381040 to 65381057 17 - TSS region transcription start site region 33461
Tssr33462 3 65381276 to 65381289 13 - TSS region transcription start site region 33462
Tssr33463 3 65381396 to 65381400 4 - TSS region transcription start site region 33463
Tssr893 3 65390981 to 65390986 5 - TSS region transcription start site region 893
Cpgi13227 3 65392001 to 65392926 925 CpG island CpG island 13227
Tssr33464 3 65392546 to 65392562 16 - TSS region transcription start site region 33464
Tssr33465 3 65392579 to 65392595 16 - TSS region transcription start site region 33465
Cpgi13228 3 65393300 to 65393474 174 CpG island CpG island 13228
Gm5540 3 65393337 to 65395184 1847 + pseudogene predicted pseudogene 5540
Cpgi13229 3 65394800 to 65394959 159 CpG island CpG island 13229