Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:64259833-65230617

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r3 3 64258934 to 64287426 28492 - protein coding gene vomeronasal 2, receptor 3
Ifld3 3 64275818 to 64276189 371 unclassified gene induced in fatty liver dystrophy 3
Gm23897 3 64318407 to 64318564 157 - snoRNA gene predicted gene, 23897
Vmn2r-ps4 3 64332113 to 64332850 737 + pseudogene vomeronasal 2, receptor, pseudogene 4
Vmn2r-ps5 3 64339565 to 64355685 16120 - pseudogene vomeronasal 2, receptor, pseudogene 5
Vmn2r4 3 64388561 to 64415320 26759 - protein coding gene vomeronasal 2, receptor 4
Vmn2r-ps6 3 64436976 to 64438284 1308 - pseudogene vomeronasal 2, receptor, pseudogene 6
Vmn2r-ps7 3 64442693 to 64443972 1279 - pseudogene vomeronasal 2, receptor, pseudogene 7
Gm20656 3 64447967 to 64460095 12128 + pseudogene predicted gene 20656
Vmn2r-ps8 3 64478578 to 64479316 738 + pseudogene vomeronasal 2, receptor, pseudogene 8
Vmn2r5 3 64490821 to 64507685 16864 - protein coding gene vomeronasal 2, receptor 5
Vmn2r6 3 64537501 to 64565434 27933 - protein coding gene vomeronasal 2, receptor 6
Vmn2r-ps9 3 64591608 to 64592895 1287 - pseudogene vomeronasal 2, receptor, pseudogene 9
Gm20657 3 64596913 to 64605773 8860 + pseudogene predicted gene 20657
Gm3040 3 64600429 to 64601138 709 + pseudogene predicted gene 3040
Vmn2r-ps10 3 64623254 to 64623992 738 + pseudogene vomeronasal 2, receptor, pseudogene 10
Vmn2r-ps11 3 64632574 to 64662261 29687 - pseudogene vomeronasal 2, receptor, pseudogene 11
Gm26939 3 64632863 to 64844743 211880 - unclassified non-coding RNA gene predicted gene, 26939
Vmn2r7 3 64690660 to 64719602 28942 - protein coding gene vomeronasal 2, receptor 7
Vmn2r-ps12 3 64744833 to 64745617 784 - pseudogene vomeronasal 2, receptor, pseudogene 12
Tssr33451 3 64757468 to 64757470 2 - TSS region transcription start site region 33451
Tssr33452 3 64844717 to 64844728 11 - TSS region transcription start site region 33452
Gm25222 3 64894471 to 64894596 125 - snoRNA gene predicted gene, 25222
Vmn2r-ps13 3 64899157 to 64899762 605 + pseudogene vomeronasal 2, receptor, pseudogene 13
Tssr29384 3 64949211 to 64949219 8 + TSS region transcription start site region 29384
Gm38048 3 64949223 to 65223701 274478 + sense overlapping lncRNA gene predicted gene, 38048
Tssr29385 3 64949229 to 64949243 14 + TSS region transcription start site region 29385
Tssr29386 3 64949290 to 64949295 5 + TSS region transcription start site region 29386
Cpgi13224 3 64949388 to 64949679 291 CpG island CpG island 13224
Tssr29387 3 64977483 to 64977496 13 + TSS region transcription start site region 29387
Tssr29388 3 64977531 to 64977546 15 + TSS region transcription start site region 29388
Tssr29389 3 64977586 to 64977597 11 + TSS region transcription start site region 29389
Tssr892 3 65108899 to 65108911 12 + TSS region transcription start site region 892
Tssr29390 3 65108968 to 65108987 19 + TSS region transcription start site region 29390
Tssr29391 3 65108996 to 65109037 41 + TSS region transcription start site region 29391
Tssr29392 3 65109043 to 65109089 46 + TSS region transcription start site region 29392
Cpgi13225 3 65109152 to 65109373 221 CpG island CpG island 13225
Tssr29393 3 65109269 to 65109287 18 + TSS region transcription start site region 29393
Tssr29394 3 65109329 to 65109340 11 + TSS region transcription start site region 29394
Tssr29395 3 65109343 to 65109420 77 + TSS region transcription start site region 29395
Kcnab1 3 65109384 to 65378223 268839 + protein coding gene potassium voltage-gated channel, shaker-related subfamily, beta member 1
Tssr29396 3 65109471 to 65109486 15 + TSS region transcription start site region 29396
Tssr29397 3 65109499 to 65109534 35 + TSS region transcription start site region 29397
Cpgi13226 3 65109794 to 65109992 198 CpG island CpG island 13226
A330015K06Rik 3 65133060 to 65302685 169625 - antisense lncRNA gene RIKEN cDNA A330015K06 gene
Tssr29398 3 65188112 to 65188143 31 + TSS region transcription start site region 29398
Tssr33453 3 65200565 to 65200566 1 - TSS region transcription start site region 33453