Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:62206982-63425635

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330121J05Rik 3 62337524 to 62340532 3008 - antisense lncRNA gene RIKEN cDNA 9330121J05 gene
Cpgi13214 3 62338545 to 62340411 1866 CpG island CpG island 13214
Arhgef26 3 62338777 to 62462221 123444 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 26
Tssr29350 3 62338941 to 62339012 71 + TSS region transcription start site region 29350
Tssr29351 3 62339024 to 62339037 13 + TSS region transcription start site region 29351
Tssr29352 3 62339573 to 62339610 37 + TSS region transcription start site region 29352
Tssr29353 3 62340046 to 62340058 12 + TSS region transcription start site region 29353
Gm33923 3 62341390 to 62350523 9133 - lncRNA gene predicted gene, 33923
Tssr889 3 62396422 to 62396426 4 + TSS region transcription start site region 889
D3Mit361 3 62433165 to 62433296 131 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology-361
Tssr29354 3 62435657 to 62435664 7 + TSS region transcription start site region 29354
Tssr29355 3 62444873 to 62444877 4 + TSS region transcription start site region 29355
Dhx36 3 62468013 to 62507004 38991 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 36
Tssr33430 3 62480194 to 62480204 10 - TSS region transcription start site region 33430
Cpgi13215 3 62506488 to 62507222 734 CpG island CpG island 13215
Tssr33431 3 62506949 to 62506967 18 - TSS region transcription start site region 33431
Tssr33432 3 62506970 to 62507027 57 - TSS region transcription start site region 33432
Gpr149 3 62529430 to 62605442 76012 - protein coding gene G protein-coupled receptor 149
Cpgi13216 3 62603503 to 62604200 697 CpG island CpG island 13216
Gm34048 3 62604932 to 62763934 159002 + lncRNA gene predicted gene, 34048
Gm18382 3 62761443 to 62762024 581 + pseudogene predicted gene, 18382
Gm40062 3 62771982 to 62860635 88653 + lncRNA gene predicted gene, 40062
Gm40063 3 62867684 to 62889000 21316 + lncRNA gene predicted gene, 40063
Gm9701 3 62923807 to 62924233 426 - pseudogene predicted gene 9701
Tssr33433 3 62924257 to 62924266 9 - TSS region transcription start site region 33433
Gm22433 3 63152217 to 63152358 141 + snoRNA gene predicted gene, 22433
Gm8388 3 63173109 to 63173860 751 - pseudogene predicted gene 8388
Cpgi13217 3 63173784 to 63174069 285 CpG island CpG island 13217
Gm40064 3 63232817 to 63245447 12630 - lncRNA gene predicted gene, 40064
Tssr29356 3 63241468 to 63241469 1 + TSS region transcription start site region 29356
Tssr29357 3 63266815 to 63266819 4 + TSS region transcription start site region 29357
Mme 3 63295224 to 63383713 88489 + protein coding gene membrane metallo endopeptidase
Cpgi13218 3 63295374 to 63296250 876 CpG island CpG island 13218
Tssr29358 3 63295424 to 63295438 14 + TSS region transcription start site region 29358
Tssr29359 3 63295440 to 63295506 66 + TSS region transcription start site region 29359
Tssr29360 3 63295524 to 63295598 74 + TSS region transcription start site region 29360
Tssr29361 3 63295612 to 63295623 11 + TSS region transcription start site region 29361
Tssr29362 3 63295815 to 63295830 15 + TSS region transcription start site region 29362
Tssr29363 3 63295992 to 63296016 24 + TSS region transcription start site region 29363
Tssr29364 3 63296164 to 63296171 7 + TSS region transcription start site region 29364
Tssr29365 3 63296176 to 63296194 18 + TSS region transcription start site region 29365
Tssr29366 3 63296201 to 63296223 22 + TSS region transcription start site region 29366
Tssr29367 3 63298005 to 63298054 49 + TSS region transcription start site region 29367
Tssr890 3 63299731 to 63299742 11 + TSS region transcription start site region 890
Tssr29368 3 63299750 to 63299765 15 + TSS region transcription start site region 29368
Tssr29369 3 63331664 to 63331670 6 + TSS region transcription start site region 29369
Tssr29370 3 63345206 to 63345227 21 + TSS region transcription start site region 29370
Tssr29371 3 63361998 to 63362024 26 + TSS region transcription start site region 29371
Tssr29372 3 63380413 to 63380460 47 + TSS region transcription start site region 29372
Tssr29373 3 63381324 to 63381354 30 + TSS region transcription start site region 29373
Tssr29374 3 63382958 to 63382964 6 + TSS region transcription start site region 29374