MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:5924283-6647079

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr32531	3	5950466 to 5950480	14	-	TSS region	transcription start site region 32531
Gm46796	3	6107017 to 6115376	8359	+	lncRNA gene	predicted gene, 46796
Tssr28286	3	6107491 to 6107503	12	+	TSS region	transcription start site region 28286
Tssr28287	3	6107519 to 6107531	12	+	TSS region	transcription start site region 28287
Tssr28288	3	6107532 to 6107554	22	+	TSS region	transcription start site region 28288
C130051G18Rik	3	6111379 to 6112306	927		unclassified gene	RIKEN cDNA C130051G18 gene
Cpgi12952	3	6136991 to 6137635	644		CpG island	CpG island 12952
Gm17934	3	6137823 to 6138244	421	-	pseudogene	predicted gene, 17934
Gm6162	3	6164895 to 6167824	2929	-	pseudogene	predicted gene 6162
Tssr32532	3	6169801 to 6169806	5	-	TSS region	transcription start site region 32532
Gm38298	3	6267783 to 6267900	117	-	pseudogene	predicted gene, 38298
Gm41989	3	6284283 to 6287079	2796	+	lncRNA gene	predicted gene, 41989
Gm23147	3	6338882 to 6338991	109	-	miRNA gene	predicted gene, 23147
Gm18658	3	6378332 to 6378601	269	-	pseudogene	predicted gene, 18658
Gm5272	3	6450607 to 6451588	981	-	pseudogene	predicted gene 5272
Tssr32533	3	6451664 to 6451675	11	-	TSS region	transcription start site region 32533
Gm38291	3	6611205 to 6611463	258	-	pseudogene	predicted gene, 38291
1700008P02Rik	3	6615418 to 6620443	5025	-	protein coding gene	RIKEN cDNA 1700008P02 gene
Tssr32534	3	6620441 to 6620444	3	-	TSS region	transcription start site region 32534
Tssr28289	3	6620568 to 6620575	7	+	TSS region	transcription start site region 28289