Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:58873855-59084026

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clrn1 3 58844028 to 58885212 41184 - protein coding gene clarin 1
Tssr33373 3 58885320 to 58885354 34 - TSS region transcription start site region 33373
Gm22491 3 58975630 to 58975731 101 + snRNA gene predicted gene, 22491
Gm25572 3 58978855 to 58979026 171 - snRNA gene predicted gene, 25572
Tssr29220 3 58987128 to 58987138 10 + TSS region transcription start site region 29220
Rpl13-ps6 3 58987170 to 58987805 635 + pseudogene ribosomal protein L13, pseudogene 6
Gm27793 3 59001620 to 59001695 75 + unclassified non-coding RNA gene predicted gene, 27793
Gm43570 3 59002471 to 59006158 3687 - antisense lncRNA gene predicted gene 43570
Cpgi13207 3 59005106 to 59007550 2444 CpG island CpG island 13207
Tssr29221 3 59005465 to 59005480 15 + TSS region transcription start site region 29221
Med12l 3 59005594 to 59318416 312822 + protein coding gene mediator complex subunit 12-like
Tssr29222 3 59005813 to 59005865 52 + TSS region transcription start site region 29222
Tssr29223 3 59005908 to 59005930 22 + TSS region transcription start site region 29223
Tssr29224 3 59080976 to 59080979 3 + TSS region transcription start site region 29224
Tssr29225 3 59081160 to 59081176 16 + TSS region transcription start site region 29225