Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:58765320-59005354

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930593A02Rik 3 58692589 to 58788524 95935 + lincRNA gene RIKEN cDNA 4930593A02 gene
Mindy4b-ps 3 58790117 to 58811938 21821 - pseudogene MINDY lysine 48 deubiquitinase 4B, pseudogene
Tssr33370 3 58810552 to 58810570 18 - TSS region transcription start site region 33370
Tssr33371 3 58822369 to 58822376 7 - TSS region transcription start site region 33371
Tssr33372 3 58822389 to 58822393 4 - TSS region transcription start site region 33372
Gm40059 3 58824992 to 58835899 10907 + lncRNA gene predicted gene, 40059
Gm40060 3 58842095 to 58866754 24659 + lncRNA gene predicted gene, 40060
Clrn1 3 58844028 to 58885212 41184 - protein coding gene clarin 1
D3Nds33 3 58869174 to 58869362 188 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 33
Tssr33373 3 58885320 to 58885354 34 - TSS region transcription start site region 33373
Gm22491 3 58975630 to 58975731 101 + snRNA gene predicted gene, 22491
Gm25572 3 58978855 to 58979026 171 - snRNA gene predicted gene, 25572
Tssr29220 3 58987128 to 58987138 10 + TSS region transcription start site region 29220
Rpl13-ps6 3 58987170 to 58987805 635 + pseudogene ribosomal protein L13, pseudogene 6
Gm27793 3 59001620 to 59001695 75 + unclassified non-coding RNA gene predicted gene, 27793
Gm43570 3 59002471 to 59006158 3687 - antisense lncRNA gene predicted gene 43570
Cpgi13207 3 59005106 to 59007550 2444 CpG island CpG island 13207