Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:57567422-57792537

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Wwtr1	3	57455649 to 57575910	120261	-	protein coding gene	WW domain containing transcription regulator 1
D3Mit172	3	57574643 to 57574795	152		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 172
Cpgi13196	3	57574666 to 57576619	1953		CpG island	CpG island 13196
Tssr33328	3	57575760 to 57575836	76	-	TSS region	transcription start site region 33328
Tssr33329	3	57575844 to 57575849	5	-	TSS region	transcription start site region 33329
Tssr33330	3	57575855 to 57575864	9	-	TSS region	transcription start site region 33330
Tssr33331	3	57575907 to 57575912	5	-	TSS region	transcription start site region 33331
Tssr33332	3	57576438 to 57576445	7	-	TSS region	transcription start site region 33332
Tssr33333	3	57576447 to 57576452	5	-	TSS region	transcription start site region 33333
Tssr33334	3	57576455 to 57576469	14	-	TSS region	transcription start site region 33334
Tssr33335	3	57576485 to 57576494	9	-	TSS region	transcription start site region 33335
Gm26671	3	57612697 to 57625824	13127	-	lincRNA gene	predicted gene, 26671
Mir6377	3	57616609 to 57616722	113	+	miRNA gene	microRNA 6377
Gm43437	3	57636883 to 57640837	3954	-	unclassified gene	predicted gene 43437
Gm46805	3	57637677 to 57640727	3050	+	lncRNA gene	predicted gene, 46805
Commd2	3	57644349 to 57651684	7335	-	protein coding gene	COMM domain containing 2
Cpgi13197	3	57651333 to 57651851	518		CpG island	CpG island 13197
Tssr33336	3	57651667 to 57651727	60	-	TSS region	transcription start site region 33336
BB187690	3	57654404 to 57655579	1175	-	unclassified gene	expressed sequence BB187690
Ankub1	3	57667422 to 57692537	25115	-	protein coding gene	ankrin repeat and ubiquitin domain containing 1
Tssr33337	3	57692527 to 57692549	22	-	TSS region	transcription start site region 33337
Gm43098	3	57696180 to 57697476	1296	-	unclassified gene	predicted gene 43098
Gm6394	3	57717813 to 57718289	476	-	pseudogene	predicted gene 6394
Tssr33338	3	57718303 to 57718320	17	-	TSS region	transcription start site region 33338
Cpgi13198	3	57735523 to 57736454	931		CpG island	CpG island 13198
Tssr29188	3	57736056 to 57736128	72	+	TSS region	transcription start site region 29188
Rnf13	3	57736062 to 57835233	99171	+	protein coding gene	ring finger protein 13
Gm9645	3	57765864 to 57766655	791	-	pseudogene	predicted gene 9645
Tssr29189	3	57779453 to 57779468	15	+	TSS region	transcription start site region 29189