Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:57300434-57550452

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tm4sf1 3 57287064 to 57301983 14919 - protein coding gene transmembrane 4 superfamily member 1
Tssr33317 3 57301943 to 57301956 13 - TSS region transcription start site region 33317
Tssr33318 3 57301957 to 57301997 40 - TSS region transcription start site region 33318
Tssr33319 3 57301999 to 57302009 10 - TSS region transcription start site region 33319
Tssr883 3 57312444 to 57312446 2 - TSS region transcription start site region 883
Tssr33320 3 57340967 to 57340971 4 - TSS region transcription start site region 33320
Tssr29182 3 57362241 to 57362252 11 + TSS region transcription start site region 29182
Gm5276 3 57362388 to 57363434 1046 + pseudogene predicted gene 5276
Gm32367 3 57379295 to 57394555 15260 - lncRNA gene predicted gene, 32367
Tssr884 3 57387325 to 57387343 18 + TSS region transcription start site region 884
Tssr33321 3 57387711 to 57387734 23 - TSS region transcription start site region 33321
Tssr33322 3 57387739 to 57387750 11 - TSS region transcription start site region 33322
Tssr33323 3 57387771 to 57387788 17 - TSS region transcription start site region 33323
Tssr885 3 57413901 to 57413909 8 + TSS region transcription start site region 885
Tm4sf4 3 57425410 to 57441677 16267 + protein coding gene transmembrane 4 superfamily member 4
Tssr29183 3 57425434 to 57425452 18 + TSS region transcription start site region 29183
Tssr29184 3 57425645 to 57425660 15 + TSS region transcription start site region 29184
Tssr29185 3 57433771 to 57433803 32 + TSS region transcription start site region 29185
Tssr29186 3 57441285 to 57441288 3 + TSS region transcription start site region 29186
Tssr29187 3 57441368 to 57441371 3 + TSS region transcription start site region 29187
D3Mit185 3 57442643 to 57442791 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 185
Wwtr1 3 57455649 to 57575910 120261 - protein coding gene WW domain containing transcription regulator 1
D3Mit170 3 57475420 to 57475523 103 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 170
Tssr33324 3 57501761 to 57501770 9 - TSS region transcription start site region 33324
Tssr33325 3 57501775 to 57501802 27 - TSS region transcription start site region 33325
Gm16016 3 57528232 to 57528781 549 + pseudogene predicted gene 16016
Tssr33326 3 57542761 to 57542762 1 - TSS region transcription start site region 33326
D3Mit68 3 57550033 to 57550207 174 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 68