MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:56180282-56710412

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nbea	3	55625195 to 56183701	558506	-	protein coding gene	neurobeachin
Cpgi13193	3	56182487 to 56184192	1705		CpG island	CpG island 13193
Tssr33308	3	56183241 to 56183272	31	-	TSS region	transcription start site region 33308
Tssr33309	3	56183678 to 56183695	17	-	TSS region	transcription start site region 33309
Tssr33310	3	56183708 to 56183757	49	-	TSS region	transcription start site region 33310
D3Dcr6	3	56187498 to 56187603	105		DNA segment	DNA Segment, Chr 3, Derry C. Roopenian 6
Gm40052	3	56217905 to 56221236	3331	-	lncRNA gene	predicted gene, 40052
Gm40053	3	56255900 to 56269938	14038	-	lncRNA gene	predicted gene, 40053
Tssr29178	3	56325286 to 56325288	2	+	TSS region	transcription start site region 29178
D3Mit334	3	56345296 to 56345412	116		DNA segment	DNA Segment, Chr 3 Massachusetts Institute of Technology 334
Gm40054	3	56347034 to 56357550	10516	-	lncRNA gene	predicted gene, 40054
D3Dcr7	3	56402560 to 56402660	100		DNA segment	DNA Segment, Chr 3, Derry C. Roopenian 7
Gm32177	3	56436001 to 56438746	2745	-	lncRNA gene	predicted gene, 32177
Gm25727	3	56445282 to 56445412	130	-	snoRNA gene	predicted gene, 25727
Cpgi13194	3	56575474 to 56575727	253		CpG island	CpG island 13194
Tssr29179	3	56575506 to 56575537	31	+	TSS region	transcription start site region 29179
Tssr29180	3	56575660 to 56575673	13	+	TSS region	transcription start site region 29180
Tssr29181	3	56575690 to 56575701	11	+	TSS region	transcription start site region 29181
Gm32237	3	56698422 to 56705065	6643	+	lncRNA gene	predicted gene, 32237