Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:55810809-56280813

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nbea 3 55625195 to 56183701 558506 - protein coding gene neurobeachin
6720451E02Rik 3 55833671 to 55834459 788 unclassified gene RIKEN cDNA 6720451E02 gene
4933417G07Rik 3 55847105 to 55848065 960 + pseudogene RIKEN cDNA 4933417G07 gene
B230206L23Rik 3 55855247 to 55856151 904 unclassified gene RIKEN cDNA B230206L23 gene
Gm31914 3 55883268 to 56000320 117052 + lncRNA gene predicted gene, 31914
Tssr29177 3 55890302 to 55890313 11 + TSS region transcription start site region 29177
Gm43376 3 55890306 to 55936699 46393 + antisense lncRNA gene predicted gene 43376
D3Dcr4 3 55943611 to 55943719 108 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 4
Gm22784 3 55956782 to 55956913 131 - snoRNA gene predicted gene, 22784
D3Dcr5 3 55986213 to 55986311 98 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 5
Gm42840 3 56014918 to 56017168 2250 - unclassified gene predicted gene 42840
Tssr33305 3 56045809 to 56045813 4 - TSS region transcription start site region 33305
Tssr33306 3 56059293 to 56059306 13 - TSS region transcription start site region 33306
Gm42842 3 56123156 to 56126159 3003 - unclassified gene predicted gene 42842
Gm42841 3 56128596 to 56130527 1931 - unclassified gene predicted gene 42841
Gm42843 3 56163954 to 56167569 3615 - unclassified gene predicted gene 42843
Tssr33307 3 56174262 to 56174266 4 - TSS region transcription start site region 33307
Cpgi13193 3 56182487 to 56184192 1705 CpG island CpG island 13193
Tssr33308 3 56183241 to 56183272 31 - TSS region transcription start site region 33308
Tssr33309 3 56183678 to 56183695 17 - TSS region transcription start site region 33309
Tssr33310 3 56183708 to 56183757 49 - TSS region transcription start site region 33310
D3Dcr6 3 56187498 to 56187603 105 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 6
Gm40052 3 56217905 to 56221236 3331 - lncRNA gene predicted gene, 40052
Gm40053 3 56255900 to 56269938 14038 - lncRNA gene predicted gene, 40053