Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:5580628-6140652

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr28282 3 5750803 to 5750804 1 + TSS region transcription start site region 28282
Gm8797 3 5750893 to 5751295 402 + protein coding gene predicted pseudogene 8797
D3Mit117 3 5806440 to 5806615 175 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 117
Tssr28283 3 5860331 to 5860367 36 + TSS region transcription start site region 28283
Cpgi12951 3 5860625 to 5860830 205 CpG island CpG island 12951
Tssr28284 3 5860628 to 5860652 24 + TSS region transcription start site region 28284
Tssr28285 3 5860668 to 5860718 50 + TSS region transcription start site region 28285
Tssr813 3 5860696 to 5860726 30 - TSS region transcription start site region 813
Gm37350 3 5880832 to 5885503 4671 - lincRNA gene predicted gene, 37350
Gm25352 3 5881041 to 5881150 109 + miRNA gene predicted gene, 25352
Gm25144 3 5885595 to 5885704 109 + miRNA gene predicted gene, 25144
Tssr32531 3 5950466 to 5950480 14 - TSS region transcription start site region 32531
Gm46796 3 6107017 to 6115376 8359 + lncRNA gene predicted gene, 46796
Tssr28286 3 6107491 to 6107503 12 + TSS region transcription start site region 28286
Tssr28287 3 6107519 to 6107531 12 + TSS region transcription start site region 28287
Tssr28288 3 6107532 to 6107554 22 + TSS region transcription start site region 28288
C130051G18Rik 3 6111379 to 6112306 927 unclassified gene RIKEN cDNA C130051G18 gene
Cpgi12952 3 6136991 to 6137635 644 CpG island CpG island 12952
Gm17934 3 6137823 to 6138244 421 - pseudogene predicted gene, 17934