Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:55607530-55957549

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nbea 3 55625195 to 56183701 558506 - protein coding gene neurobeachin
Gm46804 3 55705887 to 55715652 9765 + lncRNA gene predicted gene, 46804
Tssr29172 3 55707507 to 55707525 18 + TSS region transcription start site region 29172
Tssr29173 3 55707543 to 55707548 5 + TSS region transcription start site region 29173
D430004P15Rik 3 55725927 to 55728436 2509 unclassified gene Riken cDNA D430004P15 gene
Tssr882 3 55740604 to 55740609 5 + TSS region transcription start site region 882
Cpgi13190 3 55780078 to 55780962 884 CpG island CpG island 13190
Tssr33299 3 55780684 to 55780698 14 - TSS region transcription start site region 33299
Tssr33300 3 55780872 to 55780895 23 - TSS region transcription start site region 33300
Tssr29174 3 55782500 to 55782521 21 + TSS region transcription start site region 29174
Mab21l1 3 55782510 to 55785001 2491 + protein coding gene mab-21-like 1
Tssr29175 3 55782530 to 55782549 19 + TSS region transcription start site region 29175
Cpgi13191 3 55782618 to 55784123 1505 CpG island CpG island 13191
Tssr29176 3 55783382 to 55783404 22 + TSS region transcription start site region 29176
Tssr33301 3 55783470 to 55783492 22 - TSS region transcription start site region 33301
Tssr33302 3 55784340 to 55784352 12 - TSS region transcription start site region 33302
Cpgi13192 3 55787508 to 55788114 606 CpG island CpG island 13192
Tssr33303 3 55788745 to 55788749 4 - TSS region transcription start site region 33303
Tssr33304 3 55792416 to 55792437 21 - TSS region transcription start site region 33304
6720451E02Rik 3 55833671 to 55834459 788 unclassified gene RIKEN cDNA 6720451E02 gene
4933417G07Rik 3 55847105 to 55848065 960 + pseudogene RIKEN cDNA 4933417G07 gene
B230206L23Rik 3 55855247 to 55856151 904 unclassified gene RIKEN cDNA B230206L23 gene
Gm31914 3 55883268 to 56000320 117052 + lncRNA gene predicted gene, 31914
Tssr29177 3 55890302 to 55890313 11 + TSS region transcription start site region 29177
Gm43376 3 55890306 to 55936699 46393 + antisense lncRNA gene predicted gene 43376
D3Dcr4 3 55943611 to 55943719 108 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 4
Gm22784 3 55956782 to 55956913 131 - snoRNA gene predicted gene, 22784