Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:54750582-54806257

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13174	3	54754975 to 54756277	1302		CpG island	CpG island 13174
Tssr29141	3	54755541 to 54755571	30	+	TSS region	transcription start site region 29141
Tssr29142	3	54755574 to 54755589	15	+	TSS region	transcription start site region 29142
Smad9	3	54755582 to 54801257	45675	+	protein coding gene	SMAD family member 9
Tssr29143	3	54755628 to 54755648	20	+	TSS region	transcription start site region 29143
Cpgi13175	3	54764483 to 54764740	257		CpG island	CpG island 13175
Tssr29144	3	54766483 to 54766486	3	+	TSS region	transcription start site region 29144
Cpgi13176	3	54782527 to 54782747	220		CpG island	CpG island 13176
Cpgi13177	3	54786017 to 54786403	386		CpG island	CpG island 13177
D3Mit135.1	3	54791152 to 54791279	127		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 135.1
D3Mit135	3	54791327 to 54791454	127		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 135
Cpgi13178	3	54797380 to 54797774	394		CpG island	CpG island 13178
Rfxap	3	54803115 to 54807791	4676	-	protein coding gene	regulatory factor X-associated protein