Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:53566863-53767328

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Frem2	3	53513938 to 53657355	143417	-	protein coding gene	Fras1 related extracellular matrix protein 2
Tssr879	3	53614760 to 53614761	1	+	TSS region	transcription start site region 879
Cpgi13167	3	53656116 to 53657634	1518		CpG island	CpG island 13167
Tssr33272	3	53657100 to 53657112	12	-	TSS region	transcription start site region 33272
Tssr33273	3	53657124 to 53657190	66	-	TSS region	transcription start site region 33273
Tssr33274	3	53657299 to 53657308	9	-	TSS region	transcription start site region 33274
Tssr33275	3	53657339 to 53657391	52	-	TSS region	transcription start site region 33275
Gm6073	3	53666863 to 53667328	465	-	pseudogene	predicted gene 6073
Gm6204	3	53692422 to 53692878	456	-	pseudogene	predicted gene 6204
Tssr33276	3	53692908 to 53692916	8	-	TSS region	transcription start site region 33276
Tssr29121	3	53703406 to 53703461	55	+	TSS region	transcription start site region 29121
Tssr29122	3	53725450 to 53725461	11	+	TSS region	transcription start site region 29122
Gm30735	3	53725477 to 53733018	7541	+	lincRNA gene	predicted gene, 30735
D3Mit136	3	53733933 to 53734067	134		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 136
Gm10727	3	53736225 to 53737826	1601	+	unclassified gene	predicted gene 10727
C820005J03Rik	3	53756731 to 53772950	16219	+	lincRNA gene	RIKEN cDNA C820005J03 gene