Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:53070207-53400210

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lhfp 3 53041547 to 53261679 220132 + protein coding gene lipoma HMGIC fusion partner
Gm42898 3 53072165 to 53075237 3072 - unclassified gene predicted gene 42898
Gm42899 3 53083219 to 53085885 2666 + unclassified gene predicted gene 42899
Tssr29106 3 53083611 to 53083615 4 + TSS region transcription start site region 29106
C130075A20Rik 3 53099000 to 53103175 4175 + unclassified gene RIKEN cDNA C130075A20 gene
Gm43804 3 53109668 to 53110123 455 + unclassified gene predicted gene 43804
Gm43803 3 53110396 to 53113411 3015 - antisense lncRNA gene predicted gene 43803
Gm43805 3 53112166 to 53112989 823 + unclassified gene predicted gene 43805
D3Mit67 3 53152562 to 53152704 142 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 67
Tssr29107 3 53175474 to 53175477 3 + TSS region transcription start site region 29107
D3Mit184 3 53207002 to 53207136 134 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 184
Tssr29108 3 53231726 to 53231736 10 + TSS region transcription start site region 29108
Tssr29109 3 53235207 to 53235210 3 + TSS region transcription start site region 29109
Tssr29110 3 53260511 to 53260536 25 + TSS region transcription start site region 29110
Tssr29111 3 53260818 to 53260854 36 + TSS region transcription start site region 29111
Tssr29112 3 53261199 to 53261205 6 + TSS region transcription start site region 29112
Cpgi13161 3 53334117 to 53334287 170 CpG island CpG island 13161
Gm43472 3 53346492 to 53347229 737 - pseudogene predicted gene 43472
Gm40048 3 53395750 to 53398501 2751 + lncRNA gene predicted gene, 40048