Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:52260871-52520921

Filter by:
20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tpcq1 3 50300000 to 52300000 2000000 QTL total plasma cholesterol QTL 1
Cpgi13156 3 52267553 to 52270149 2596 CpG island CpG island 13156
Foxo1 3 52268337 to 52350109 81772 + protein coding gene forkhead box O1
Tssr29089 3 52268374 to 52268388 14 + TSS region transcription start site region 29089
Tssr29090 3 52268393 to 52268405 12 + TSS region transcription start site region 29090
Tssr29091 3 52268407 to 52268424 17 + TSS region transcription start site region 29091
Gm20402 3 52268435 to 52269435 1000 - antisense lncRNA gene predicted gene 20402
Tssr29092 3 52270198 to 52270208 10 + TSS region transcription start site region 29092
Tssr29093 3 52276153 to 52276159 6 + TSS region transcription start site region 29093
Gm38034 3 52282241 to 52284309 2068 + unclassified gene predicted gene, 38034
D3Mit207 3 52284478 to 52284566 88 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 207
Tssr33259 3 52390871 to 52390921 50 - TSS region transcription start site region 33259
Tssr29094 3 52396543 to 52396552 9 + TSS region transcription start site region 29094
Cpgi13157 3 52401271 to 52401486 215 CpG island CpG island 13157
Gm34303 3 52425346 to 52425728 382 + pseudogene predicted gene, 34303
Gm38098 3 52425408 to 52425648 240 + pseudogene predicted gene, 38098
Gm38537 3 52467170 to 52493269 26099 + lncRNA gene predicted gene, 38537
Tssr29095 3 52468555 to 52468568 13 + TSS region transcription start site region 29095
Tssr29096 3 52516951 to 52516997 46 + TSS region transcription start site region 29096
Gm30173 3 52516964 to 52550219 33255 + lincRNA gene predicted gene, 30173