MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:52073802-52184001

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Maml3	3	51687320 to 52105086	417766	-	protein coding gene	mastermind like transcriptional coactivator 3
Tssr33250	3	52092732 to 52092736	4	-	TSS region	transcription start site region 33250
Cpgi13151	3	52101805 to 52104185	2380		CpG island	CpG island 13151
Tssr29085	3	52102823 to 52102837	14	+	TSS region	transcription start site region 29085
Tssr29086	3	52103346 to 52103373	27	+	TSS region	transcription start site region 29086
Cpgi13152	3	52104419 to 52105741	1322		CpG island	CpG island 13152
Tssr33251	3	52104903 to 52104922	19	-	TSS region	transcription start site region 33251
Tssr33252	3	52104984 to 52105032	48	-	TSS region	transcription start site region 33252
Tssr33253	3	52105045 to 52105056	11	-	TSS region	transcription start site region 33253
Cpgi13153	3	52128802 to 52129001	199		CpG island	CpG island 13153
Tssr29087	3	52129464 to 52129470	6	+	TSS region	transcription start site region 29087
Gm37202	3	52134047 to 52221997	87950	-	lincRNA gene	predicted gene, 37202
Gm30074	3	52172162 to 52179972	7810	-	lincRNA gene	predicted gene, 30074
D3Mit183	3	52176672 to 52176810	138		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 183
Tssr33254	3	52179952 to 52179955	3	-	TSS region	transcription start site region 33254
Tssr33255	3	52179965 to 52179976	11	-	TSS region	transcription start site region 33255
Tssr33256	3	52179986 to 52179997	11	-	TSS region	transcription start site region 33256
Tssr33257	3	52180003 to 52180014	11	-	TSS region	transcription start site region 33257