Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:52008346-52198373

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Maml3 3 51687320 to 52105086 417766 - protein coding gene mastermind like transcriptional coactivator 3
Tssr33242 3 52009066 to 52009095 29 - TSS region transcription start site region 33242
Tssr33243 3 52009133 to 52009157 24 - TSS region transcription start site region 33243
Tssr33244 3 52009169 to 52009181 12 - TSS region transcription start site region 33244
Tssr876 3 52009206 to 52009221 15 - TSS region transcription start site region 876
Tssr33245 3 52009227 to 52009240 13 - TSS region transcription start site region 33245
Tssr33246 3 52041318 to 52041323 5 - TSS region transcription start site region 33246
Tssr29082 3 52047356 to 52047378 22 + TSS region transcription start site region 29082
Tssr33247 3 52056345 to 52056367 22 - TSS region transcription start site region 33247
Tssr33248 3 52056405 to 52056428 23 - TSS region transcription start site region 33248
C130089K02Rik 3 52057285 to 52064244 6959 - unclassified gene RIKEN cDNA C130089K02 gene
Tssr33249 3 52064227 to 52064232 5 - TSS region transcription start site region 33249
Cpgi13150 3 52069766 to 52069988 222 CpG island CpG island 13150
Tssr29083 3 52069969 to 52069970 1 + TSS region transcription start site region 29083
Tssr877 3 52070000 to 52070022 22 - TSS region transcription start site region 877
Tssr29084 3 52070109 to 52070159 50 + TSS region transcription start site region 29084
5430420F09Rik 3 52071589 to 52073387 1798 - unclassified gene RIKEN cDNA 5430420F09 gene
Tssr33250 3 52092732 to 52092736 4 - TSS region transcription start site region 33250
Cpgi13151 3 52101805 to 52104185 2380 CpG island CpG island 13151
Tssr29085 3 52102823 to 52102837 14 + TSS region transcription start site region 29085
Tssr29086 3 52103346 to 52103373 27 + TSS region transcription start site region 29086
Cpgi13152 3 52104419 to 52105741 1322 CpG island CpG island 13152
Tssr33251 3 52104903 to 52104922 19 - TSS region transcription start site region 33251
Tssr33252 3 52104984 to 52105032 48 - TSS region transcription start site region 33252
Tssr33253 3 52105045 to 52105056 11 - TSS region transcription start site region 33253
Cpgi13153 3 52128802 to 52129001 199 CpG island CpG island 13153
Tssr29087 3 52129464 to 52129470 6 + TSS region transcription start site region 29087
Gm37202 3 52134047 to 52221997 87950 - lincRNA gene predicted gene, 37202
Gm30074 3 52172162 to 52179972 7810 - lincRNA gene predicted gene, 30074
D3Mit183 3 52176672 to 52176810 138 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 183
Tssr33254 3 52179952 to 52179955 3 - TSS region transcription start site region 33254
Tssr33255 3 52179965 to 52179976 11 - TSS region transcription start site region 33255
Tssr33256 3 52179986 to 52179997 11 - TSS region transcription start site region 33256
Tssr33257 3 52180003 to 52180014 11 - TSS region transcription start site region 33257
Gm38132 3 52186573 to 52187957 1384 + unclassified non-coding RNA gene predicted gene, 38132
Tssr29088 3 52186583 to 52186602 19 + TSS region transcription start site region 29088
Cpgi13154 3 52196044 to 52196516 472 CpG island CpG island 13154
Tssr33258 3 52198060 to 52198073 13 - TSS region transcription start site region 33258
Gm37170 3 52198248 to 52200489 2241 + lincRNA gene predicted gene, 37170