MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:5171189-5271203

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
2700069I18Rik	3	5177824 to 5220823	42999	-	antisense lncRNA gene	RIKEN cDNA 2700069I18 gene
Cpgi12947	3	5210235 to 5210508	273		CpG island	CpG island 12947
Gm10748	3	5212838 to 5215216	2378	+	unclassified gene	predicted gene 10748
Cpgi12948	3	5218267 to 5218543	276		CpG island	CpG island 12948
Tssr28265	3	5218516 to 5218544	28	+	TSS region	transcription start site region 28265
Zfhx4	3	5218526 to 5415857	197331	+	protein coding gene	zinc finger homeodomain 4
Tssr28266	3	5218546 to 5218561	15	+	TSS region	transcription start site region 28266
Tssr28267	3	5218563 to 5218587	24	+	TSS region	transcription start site region 28267
Tssr28268	3	5218590 to 5218614	24	+	TSS region	transcription start site region 28268
Tssr28269	3	5218629 to 5218684	55	+	TSS region	transcription start site region 28269
Cpgi12949	3	5218752 to 5219897	1145		CpG island	CpG island 12949
Tssr28270	3	5218819 to 5218830	11	+	TSS region	transcription start site region 28270
Tssr28271	3	5219025 to 5219036	11	+	TSS region	transcription start site region 28271
Tssr28272	3	5219039 to 5219053	14	+	TSS region	transcription start site region 28272
Tssr28273	3	5219060 to 5219074	14	+	TSS region	transcription start site region 28273
Tssr32523	3	5220771 to 5220795	24	-	TSS region	transcription start site region 32523
Tssr28274	3	5221048 to 5221069	21	+	TSS region	transcription start site region 28274
Tssr28275	3	5221189 to 5221203	14	+	TSS region	transcription start site region 28275
Tssr28276	3	5221225 to 5221245	20	+	TSS region	transcription start site region 28276