Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51698912-51959028

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13147 3 51701436 to 51701839 403 CpG island CpG island 13147
Gm46803 3 51707717 to 51712255 4538 + lncRNA gene predicted gene, 46803
Tssr33232 3 51750859 to 51750868 9 - TSS region transcription start site region 33232
Gm37342 3 51757124 to 51762088 4964 - unclassified gene predicted gene, 37342
D3Mit119 3 51759815 to 51759955 140 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 119
Tssr29078 3 51765549 to 51765560 11 + TSS region transcription start site region 29078
Tssr29079 3 51765661 to 51765695 34 + TSS region transcription start site region 29079
Tssr33233 3 51788647 to 51788654 7 - TSS region transcription start site region 33233
Tssr33234 3 51788703 to 51788714 11 - TSS region transcription start site region 33234
Tssr29080 3 51788975 to 51788991 16 + TSS region transcription start site region 29080
Tssr33235 3 51789125 to 51789129 4 - TSS region transcription start site region 33235
Tssr33236 3 51796516 to 51796538 22 - TSS region transcription start site region 33236
Gm37229 3 51812951 to 51819309 6358 + antisense lncRNA gene predicted gene, 37229
Tssr33237 3 51814015 to 51814023 8 - TSS region transcription start site region 33237
n-R5s196 3 51828912 to 51829028 116 + rRNA gene nuclear encoded rRNA 5S 196
3110080O07Rik 3 51829385 to 51830405 1020 - unclassified gene RIKEN cDNA 3110080O07 gene
Gm38000 3 51867345 to 51868559 1214 - unclassified gene predicted gene, 38000
D3Mit354 3 51868220 to 51868563 343 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 354
Gm37675 3 51872990 to 51875836 2846 - unclassified gene predicted gene, 37675
Tssr33238 3 51875808 to 51875809 1 - TSS region transcription start site region 33238
Tssr29081 3 51879369 to 51879370 1 + TSS region transcription start site region 29081
Gm38252 3 51884276 to 51886891 2615 - unclassified gene predicted gene, 38252
Tssr33239 3 51903356 to 51903369 13 - TSS region transcription start site region 33239
Gm10728 3 51906986 to 51908816 1830 - pseudogene predicted gene 10728
Tssr33240 3 51930029 to 51930032 3 - TSS region transcription start site region 33240
Cpgi13148 3 51953298 to 51953472 174 CpG island CpG island 13148