Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51637124-51882088

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit153 3 51647204 to 51647353 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 153
Tssr29066 3 51652910 to 51652931 21 + TSS region transcription start site region 29066
Tssr29067 3 51660353 to 51660364 11 + TSS region transcription start site region 29067
Mgst2 3 51660360 to 51682675 22315 + protein coding gene microsomal glutathione S-transferase 2
Tssr29068 3 51660372 to 51660375 3 + TSS region transcription start site region 29068
Tssr29069 3 51660378 to 51660395 17 + TSS region transcription start site region 29069
Tssr29070 3 51660396 to 51660406 10 + TSS region transcription start site region 29070
Tssr29071 3 51661001 to 51661005 4 + TSS region transcription start site region 29071
Tssr29072 3 51661067 to 51661070 3 + TSS region transcription start site region 29072
Tssr29073 3 51661167 to 51661189 22 + TSS region transcription start site region 29073
Tssr29074 3 51661209 to 51661250 41 + TSS region transcription start site region 29074
Tssr33231 3 51662778 to 51662798 20 - TSS region transcription start site region 33231
Tssr29075 3 51666114 to 51666130 16 + TSS region transcription start site region 29075
Gm37261 3 51672801 to 51673901 1100 + unclassified gene predicted gene, 37261
Tssr29076 3 51675150 to 51675153 3 + TSS region transcription start site region 29076
Tssr29077 3 51682613 to 51682625 12 + TSS region transcription start site region 29077
Maml3 3 51687320 to 52105086 417766 - protein coding gene mastermind like transcriptional coactivator 3
Gm10729 3 51693716 to 51695090 1374 + protein coding gene predicted gene 10729
Cpgi13146 3 51694230 to 51694737 507 CpG island CpG island 13146
Cpgi13147 3 51701436 to 51701839 403 CpG island CpG island 13147
Gm46803 3 51707717 to 51712255 4538 + lncRNA gene predicted gene, 46803
Tssr33232 3 51750859 to 51750868 9 - TSS region transcription start site region 33232
Gm37342 3 51757124 to 51762088 4964 - unclassified gene predicted gene, 37342
D3Mit119 3 51759815 to 51759955 140 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 119
Tssr29078 3 51765549 to 51765560 11 + TSS region transcription start site region 29078
Tssr29079 3 51765661 to 51765695 34 + TSS region transcription start site region 29079
Tssr33233 3 51788647 to 51788654 7 - TSS region transcription start site region 33233
Tssr33234 3 51788703 to 51788714 11 - TSS region transcription start site region 33234
Tssr29080 3 51788975 to 51788991 16 + TSS region transcription start site region 29080
Tssr33235 3 51789125 to 51789129 4 - TSS region transcription start site region 33235
Tssr33236 3 51796516 to 51796538 22 - TSS region transcription start site region 33236
Gm37229 3 51812951 to 51819309 6358 + antisense lncRNA gene predicted gene, 37229
Tssr33237 3 51814015 to 51814023 8 - TSS region transcription start site region 33237
n-R5s196 3 51828912 to 51829028 116 + rRNA gene nuclear encoded rRNA 5S 196
3110080O07Rik 3 51829385 to 51830405 1020 - unclassified gene RIKEN cDNA 3110080O07 gene
Gm38000 3 51867345 to 51868559 1214 - unclassified gene predicted gene, 38000
D3Mit354 3 51868220 to 51868563 343 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 354
Gm37675 3 51872990 to 51875836 2846 - unclassified gene predicted gene, 37675
Tssr33238 3 51875808 to 51875809 1 - TSS region transcription start site region 33238
Tssr29081 3 51879369 to 51879370 1 + TSS region transcription start site region 29081