Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51561496-51711928

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13142 3 51559665 to 51561565 1900 CpG island CpG island 13142
5031434O11Rik 3 51560035 to 51567117 7082 + lncRNA gene RIKEN cDNA 5031434O11 gene
Tssr33229 3 51561782 to 51561818 36 - TSS region transcription start site region 33229
Tssr33230 3 51566300 to 51566303 3 - TSS region transcription start site region 33230
Gm38334 3 51571111 to 51571423 312 - pseudogene predicted gene, 38334
Cpgi13143 3 51572652 to 51573150 498 CpG island CpG island 13143
5430433H01Rik 3 51582306 to 51582847 541 + unclassified gene RIKEN cDNA 5430433H01 gene
Tssr29065 3 51590707 to 51590714 7 + TSS region transcription start site region 29065
Cpgi13144 3 51603973 to 51604187 214 CpG island CpG island 13144
Gm38247 3 51636496 to 51636928 432 - pseudogene predicted gene, 38247
Tssr875 3 51636731 to 51636752 21 + TSS region transcription start site region 875
Cpgi13145 3 51636773 to 51636964 191 CpG island CpG island 13145
D3Mit153 3 51647204 to 51647353 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 153
Tssr29066 3 51652910 to 51652931 21 + TSS region transcription start site region 29066
Tssr29067 3 51660353 to 51660364 11 + TSS region transcription start site region 29067
Mgst2 3 51660360 to 51682675 22315 + protein coding gene microsomal glutathione S-transferase 2
Tssr29068 3 51660372 to 51660375 3 + TSS region transcription start site region 29068
Tssr29069 3 51660378 to 51660395 17 + TSS region transcription start site region 29069
Tssr29070 3 51660396 to 51660406 10 + TSS region transcription start site region 29070
Tssr29071 3 51661001 to 51661005 4 + TSS region transcription start site region 29071
Tssr29072 3 51661067 to 51661070 3 + TSS region transcription start site region 29072
Tssr29073 3 51661167 to 51661189 22 + TSS region transcription start site region 29073
Tssr29074 3 51661209 to 51661250 41 + TSS region transcription start site region 29074
Tssr33231 3 51662778 to 51662798 20 - TSS region transcription start site region 33231
Tssr29075 3 51666114 to 51666130 16 + TSS region transcription start site region 29075
Gm37261 3 51672801 to 51673901 1100 + unclassified gene predicted gene, 37261
Tssr29076 3 51675150 to 51675153 3 + TSS region transcription start site region 29076
Tssr29077 3 51682613 to 51682625 12 + TSS region transcription start site region 29077
Maml3 3 51687320 to 52105086 417766 - protein coding gene mastermind like transcriptional coactivator 3
Gm10729 3 51693716 to 51695090 1374 + protein coding gene predicted gene 10729
Cpgi13146 3 51694230 to 51694737 507 CpG island CpG island 13146
Cpgi13147 3 51701436 to 51701839 403 CpG island CpG island 13147
Gm46803 3 51707717 to 51712255 4538 + lncRNA gene predicted gene, 46803