Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51561001-51761005

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13142	3	51559665 to 51561565	1900		CpG island	CpG island 13142
5031434O11Rik	3	51560035 to 51567117	7082	+	lncRNA gene	RIKEN cDNA 5031434O11 gene
Tssr33229	3	51561782 to 51561818	36	-	TSS region	transcription start site region 33229
Tssr33230	3	51566300 to 51566303	3	-	TSS region	transcription start site region 33230
Gm38334	3	51571111 to 51571423	312	-	pseudogene	predicted gene, 38334
Cpgi13143	3	51572652 to 51573150	498		CpG island	CpG island 13143
5430433H01Rik	3	51582306 to 51582847	541	+	unclassified gene	RIKEN cDNA 5430433H01 gene
Tssr29065	3	51590707 to 51590714	7	+	TSS region	transcription start site region 29065
Cpgi13144	3	51603973 to 51604187	214		CpG island	CpG island 13144
Gm38247	3	51636496 to 51636928	432	-	pseudogene	predicted gene, 38247
Tssr875	3	51636731 to 51636752	21	+	TSS region	transcription start site region 875
Cpgi13145	3	51636773 to 51636964	191		CpG island	CpG island 13145
D3Mit153	3	51647204 to 51647353	149		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 153
Tssr29066	3	51652910 to 51652931	21	+	TSS region	transcription start site region 29066
Tssr29067	3	51660353 to 51660364	11	+	TSS region	transcription start site region 29067
Mgst2	3	51660360 to 51682675	22315	+	protein coding gene	microsomal glutathione S-transferase 2
Tssr29068	3	51660372 to 51660375	3	+	TSS region	transcription start site region 29068
Tssr29069	3	51660378 to 51660395	17	+	TSS region	transcription start site region 29069
Tssr29070	3	51660396 to 51660406	10	+	TSS region	transcription start site region 29070
Tssr29071	3	51661001 to 51661005	4	+	TSS region	transcription start site region 29071
Tssr29072	3	51661067 to 51661070	3	+	TSS region	transcription start site region 29072
Tssr29073	3	51661167 to 51661189	22	+	TSS region	transcription start site region 29073
Tssr29074	3	51661209 to 51661250	41	+	TSS region	transcription start site region 29074
Tssr33231	3	51662778 to 51662798	20	-	TSS region	transcription start site region 33231
Tssr29075	3	51666114 to 51666130	16	+	TSS region	transcription start site region 29075
Gm37261	3	51672801 to 51673901	1100	+	unclassified gene	predicted gene, 37261
Tssr29076	3	51675150 to 51675153	3	+	TSS region	transcription start site region 29076
Tssr29077	3	51682613 to 51682625	12	+	TSS region	transcription start site region 29077
Maml3	3	51687320 to 52105086	417766	-	protein coding gene	mastermind like transcriptional coactivator 3
Gm10729	3	51693716 to 51695090	1374	+	protein coding gene	predicted gene 10729
Cpgi13146	3	51694230 to 51694737	507		CpG island	CpG island 13146
Cpgi13147	3	51701436 to 51701839	403		CpG island	CpG island 13147
Gm46803	3	51707717 to 51712255	4538	+	lncRNA gene	predicted gene, 46803
Tssr33232	3	51750859 to 51750868	9	-	TSS region	transcription start site region 33232
Gm37342	3	51757124 to 51762088	4964	-	unclassified gene	predicted gene, 37342
D3Mit119	3	51759815 to 51759955	140		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 119