Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51520707-51660714

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Setd7 3 51515318 to 51560823 45505 - protein coding gene SET domain containing (lysine methyltransferase) 7
Tssr33220 3 51521335 to 51521342 7 - TSS region transcription start site region 33220
D3Ertd491e 3 51538164 to 51538369 205 DNA segment DNA segment, Chr 3, ERATO Doi 491, expressed
Tssr33221 3 51554051 to 51554060 9 - TSS region transcription start site region 33221
Tssr33222 3 51554072 to 51554083 11 - TSS region transcription start site region 33222
Tssr33223 3 51554093 to 51554102 9 - TSS region transcription start site region 33223
Gm38200 3 51557542 to 51559652 2110 - unclassified gene predicted gene, 38200
Tssr33224 3 51559581 to 51559597 16 - TSS region transcription start site region 33224
Tssr33225 3 51559620 to 51559633 13 - TSS region transcription start site region 33225
Cpgi13142 3 51559665 to 51561565 1900 CpG island CpG island 13142
Tssr29063 3 51559769 to 51559781 12 + TSS region transcription start site region 29063
Tssr29064 3 51559973 to 51559976 3 + TSS region transcription start site region 29064
5031434O11Rik 3 51560035 to 51567117 7082 + lncRNA gene RIKEN cDNA 5031434O11 gene
Tssr33226 3 51560595 to 51560686 91 - TSS region transcription start site region 33226
Tssr33227 3 51560801 to 51560809 8 - TSS region transcription start site region 33227
Tssr33228 3 51560816 to 51560875 59 - TSS region transcription start site region 33228
Tssr33229 3 51561782 to 51561818 36 - TSS region transcription start site region 33229
Tssr33230 3 51566300 to 51566303 3 - TSS region transcription start site region 33230
Gm38334 3 51571111 to 51571423 312 - pseudogene predicted gene, 38334
Cpgi13143 3 51572652 to 51573150 498 CpG island CpG island 13143
5430433H01Rik 3 51582306 to 51582847 541 + unclassified gene RIKEN cDNA 5430433H01 gene
Tssr29065 3 51590707 to 51590714 7 + TSS region transcription start site region 29065
Cpgi13144 3 51603973 to 51604187 214 CpG island CpG island 13144
Gm38247 3 51636496 to 51636928 432 - pseudogene predicted gene, 38247
Tssr875 3 51636731 to 51636752 21 + TSS region transcription start site region 875
Cpgi13145 3 51636773 to 51636964 191 CpG island CpG island 13145
D3Mit153 3 51647204 to 51647353 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 153
Tssr29066 3 51652910 to 51652931 21 + TSS region transcription start site region 29066
Tssr29067 3 51660353 to 51660364 11 + TSS region transcription start site region 29067
Mgst2 3 51660360 to 51682675 22315 + protein coding gene microsomal glutathione S-transferase 2
Tssr29068 3 51660372 to 51660375 3 + TSS region transcription start site region 29068
Tssr29069 3 51660378 to 51660395 17 + TSS region transcription start site region 29069
Tssr29070 3 51660396 to 51660406 10 + TSS region transcription start site region 29070