Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51246167-51386274

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Noct 3 51224447 to 51251644 27197 + protein coding gene nocturnin
Elf2 3 51252720 to 51340663 87943 - protein coding gene E74-like factor 2
Cpgi13132 3 51275877 to 51277801 1924 CpG island CpG island 13132
Tssr33194 3 51276026 to 51276060 34 - TSS region transcription start site region 33194
Tssr29048 3 51276257 to 51276274 17 + TSS region transcription start site region 29048
4930577N17Rik 3 51276759 to 51278383 1624 + lncRNA gene RIKEN cDNA 4930577N17 gene
Tssr29049 3 51276847 to 51276863 16 + TSS region transcription start site region 29049
Tssr33195 3 51277277 to 51277306 29 - TSS region transcription start site region 33195
Tssr33196 3 51277311 to 51277443 132 - TSS region transcription start site region 33196
Tssr33197 3 51277470 to 51277485 15 - TSS region transcription start site region 33197
Gm24282 3 51297179 to 51297244 65 + miRNA gene predicted gene, 24282
Gm37399 3 51302488 to 51302903 415 - unclassified gene predicted gene, 37399
D3Mit274 3 51316167 to 51316274 107 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 274
Tssr33198 3 51334284 to 51334293 9 - TSS region transcription start site region 33198
Cpgi13133 3 51339650 to 51342165 2515 CpG island CpG island 13133
Tssr29050 3 51340165 to 51340192 27 + TSS region transcription start site region 29050
Tssr29051 3 51340203 to 51340213 10 + TSS region transcription start site region 29051
Tssr33199 3 51340514 to 51340521 7 - TSS region transcription start site region 33199
Tssr33200 3 51340524 to 51340534 10 - TSS region transcription start site region 33200
Tssr33201 3 51340543 to 51340554 11 - TSS region transcription start site region 33201
Tssr33202 3 51340555 to 51340584 29 - TSS region transcription start site region 33202
Tssr33203 3 51340628 to 51340681 53 - TSS region transcription start site region 33203
Tssr33204 3 51340818 to 51340821 3 - TSS region transcription start site region 33204
Tssr29052 3 51340842 to 51340884 42 + TSS region transcription start site region 29052
n-TPtgg7 3 51358354 to 51358425 71 + tRNA gene nuclear encoded tRNA proline 7 (anticodon TGG)
Cpgi13134 3 51358632 to 51359218 586 CpG island CpG island 13134
n-TPagg5 3 51359407 to 51359478 71 + tRNA gene nuclear encoded tRNA proline 5 (anticodon AGG)
Cpgi13135 3 51365151 to 51365512 361 CpG island CpG island 13135
Gm37203 3 51370222 to 51370606 384 + pseudogene predicted gene, 37203
Gm5103 3 51378046 to 51386324 8278 + lincRNA gene predicted gene 5103
Cpgi13136 3 51378434 to 51378701 267 CpG island CpG island 13136