Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51227720-51365663

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Noct	3	51224447 to 51251644	27197	+	protein coding gene	nocturnin
Tssr29046	3	51228322 to 51228327	5	+	TSS region	transcription start site region 29046
Gm38357	3	51231917 to 51234380	2463	+	unclassified gene	predicted gene, 38357
Tssr29047	3	51232919 to 51232921	2	+	TSS region	transcription start site region 29047
Elf2	3	51252720 to 51340663	87943	-	protein coding gene	E74-like factor 2
Cpgi13132	3	51275877 to 51277801	1924		CpG island	CpG island 13132
Tssr33194	3	51276026 to 51276060	34	-	TSS region	transcription start site region 33194
Tssr29048	3	51276257 to 51276274	17	+	TSS region	transcription start site region 29048
4930577N17Rik	3	51276759 to 51278383	1624	+	lncRNA gene	RIKEN cDNA 4930577N17 gene
Tssr29049	3	51276847 to 51276863	16	+	TSS region	transcription start site region 29049
Tssr33195	3	51277277 to 51277306	29	-	TSS region	transcription start site region 33195
Tssr33196	3	51277311 to 51277443	132	-	TSS region	transcription start site region 33196
Tssr33197	3	51277470 to 51277485	15	-	TSS region	transcription start site region 33197
Gm24282	3	51297179 to 51297244	65	+	miRNA gene	predicted gene, 24282
Gm37399	3	51302488 to 51302903	415	-	unclassified gene	predicted gene, 37399
D3Mit274	3	51316167 to 51316274	107		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 274
Tssr33198	3	51334284 to 51334293	9	-	TSS region	transcription start site region 33198
Cpgi13133	3	51339650 to 51342165	2515		CpG island	CpG island 13133
Tssr29050	3	51340165 to 51340192	27	+	TSS region	transcription start site region 29050
Tssr29051	3	51340203 to 51340213	10	+	TSS region	transcription start site region 29051
Tssr33199	3	51340514 to 51340521	7	-	TSS region	transcription start site region 33199
Tssr33200	3	51340524 to 51340534	10	-	TSS region	transcription start site region 33200
Tssr33201	3	51340543 to 51340554	11	-	TSS region	transcription start site region 33201
Tssr33202	3	51340555 to 51340584	29	-	TSS region	transcription start site region 33202
Tssr33203	3	51340628 to 51340681	53	-	TSS region	transcription start site region 33203
Tssr33204	3	51340818 to 51340821	3	-	TSS region	transcription start site region 33204
Tssr29052	3	51340842 to 51340884	42	+	TSS region	transcription start site region 29052
n-TPtgg7	3	51358354 to 51358425	71	+	tRNA gene	nuclear encoded tRNA proline 7 (anticodon TGG)
Cpgi13134	3	51358632 to 51359218	586		CpG island	CpG island 13134
n-TPagg5	3	51359407 to 51359478	71	+	tRNA gene	nuclear encoded tRNA proline 5 (anticodon AGG)
Cpgi13135	3	51365151 to 51365512	361		CpG island	CpG island 13135