Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:51159912-51289941

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr33189 3 51210180 to 51210194 14 - TSS region transcription start site region 33189
Tssr29031 3 51210287 to 51210298 11 + TSS region transcription start site region 29031
Tssr29032 3 51210312 to 51210340 28 + TSS region transcription start site region 29032
Tssr29033 3 51210352 to 51210357 5 + TSS region transcription start site region 29033
Tssr29034 3 51210367 to 51210374 7 + TSS region transcription start site region 29034
Tssr33190 3 51211489 to 51211494 5 - TSS region transcription start site region 33190
Tssr33191 3 51211559 to 51211571 12 - TSS region transcription start site region 33191
Gm40044 3 51218475 to 51220334 1859 - lncRNA gene predicted gene, 40044
Tssr29035 3 51221189 to 51221200 11 + TSS region transcription start site region 29035
Tssr29036 3 51221203 to 51221211 8 + TSS region transcription start site region 29036
Tssr29037 3 51221231 to 51221245 14 + TSS region transcription start site region 29037
Tssr33192 3 51222350 to 51222388 38 - TSS region transcription start site region 33192
Tssr29038 3 51223838 to 51223855 17 + TSS region transcription start site region 29038
Tssr29039 3 51223899 to 51223912 13 + TSS region transcription start site region 29039
Cpgi13131 3 51224342 to 51225722 1380 CpG island CpG island 13131
Noct 3 51224447 to 51251644 27197 + protein coding gene nocturnin
Tssr29040 3 51224461 to 51224475 14 + TSS region transcription start site region 29040
Tssr29041 3 51224515 to 51224528 13 + TSS region transcription start site region 29041
Tssr29042 3 51224545 to 51224560 15 + TSS region transcription start site region 29042
Tssr33193 3 51224596 to 51224625 29 - TSS region transcription start site region 33193
Tssr29043 3 51224787 to 51224807 20 + TSS region transcription start site region 29043
Tssr29044 3 51224869 to 51224882 13 + TSS region transcription start site region 29044
Tssr29045 3 51224912 to 51224941 29 + TSS region transcription start site region 29045
Tssr29046 3 51228322 to 51228327 5 + TSS region transcription start site region 29046
Gm38357 3 51231917 to 51234380 2463 + unclassified gene predicted gene, 38357
Tssr29047 3 51232919 to 51232921 2 + TSS region transcription start site region 29047
Elf2 3 51252720 to 51340663 87943 - protein coding gene E74-like factor 2
Cpgi13132 3 51275877 to 51277801 1924 CpG island CpG island 13132
Tssr33194 3 51276026 to 51276060 34 - TSS region transcription start site region 33194
Tssr29048 3 51276257 to 51276274 17 + TSS region transcription start site region 29048
4930577N17Rik 3 51276759 to 51278383 1624 + lncRNA gene RIKEN cDNA 4930577N17 gene
Tssr29049 3 51276847 to 51276863 16 + TSS region transcription start site region 29049
Tssr33195 3 51277277 to 51277306 29 - TSS region transcription start site region 33195
Tssr33196 3 51277311 to 51277443 132 - TSS region transcription start site region 33196
Tssr33197 3 51277470 to 51277485 15 - TSS region transcription start site region 33197