Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:50433398-50933401

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mos3 3 30393206 to 50684998 20291792 heritable phenotypic marker modifier of Sox10 3
Slc7a11 3 50364936 to 50499087 134151 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
Tssr33157 3 50434386 to 50434396 10 - TSS region transcription start site region 33157
Tssr33158 3 50435420 to 50435447 27 - TSS region transcription start site region 33158
Tssr33159 3 50436497 to 50436519 22 - TSS region transcription start site region 33159
Tssr29025 3 50436692 to 50436697 5 + TSS region transcription start site region 29025
Tssr33160 3 50438030 to 50438035 5 - TSS region transcription start site region 33160
Tssr33161 3 50438042 to 50438055 13 - TSS region transcription start site region 33161
Tssr33162 3 50438063 to 50438076 13 - TSS region transcription start site region 33162
Tssr33163 3 50438799 to 50438810 11 - TSS region transcription start site region 33163
Tssr33164 3 50438831 to 50438843 12 - TSS region transcription start site region 33164
Tssr33165 3 50439008 to 50439029 21 - TSS region transcription start site region 33165
Tssr29026 3 50439116 to 50439149 33 + TSS region transcription start site region 29026
Tssr33166 3 50442271 to 50442290 19 - TSS region transcription start site region 33166
Tssr33167 3 50442712 to 50442714 2 - TSS region transcription start site region 33167
Tssr33168 3 50443416 to 50443423 7 - TSS region transcription start site region 33168
Tssr33169 3 50443456 to 50443465 9 - TSS region transcription start site region 33169
Tssr33170 3 50443483 to 50443496 13 - TSS region transcription start site region 33170
Tssr33171 3 50443512 to 50443520 8 - TSS region transcription start site region 33171
Tssr873 3 50443512 to 50443540 28 + TSS region transcription start site region 873
Tssr33172 3 50443539 to 50443549 10 - TSS region transcription start site region 33172
Tssr33173 3 50443578 to 50443592 14 - TSS region transcription start site region 33173
Tssr33174 3 50443603 to 50443615 12 - TSS region transcription start site region 33174
Tssr29027 3 50443747 to 50443753 6 + TSS region transcription start site region 29027
Tssr33175 3 50443778 to 50443780 2 - TSS region transcription start site region 33175
Gm6209 3 50537486 to 50607307 69821 - unclassified non-coding RNA gene predicted gene 6209
5830415G21Rik 3 50575186 to 50576517 1331 - unclassified gene RIKEN cDNA 5830415G21 gene
Ssen2 3 50581016 to 50581166 150 QTL suseptibility to Sendai virus 2
D3Mit182 3 50581016 to 50581166 150 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 182
Gm38237 3 50598069 to 50598444 375 - pseudogene predicted gene, 38237
Tssr29028 3 50606185 to 50606190 5 + TSS region transcription start site region 29028
Tssr33176 3 50607174 to 50607186 12 - TSS region transcription start site region 33176
Tssr33177 3 50607217 to 50607227 10 - TSS region transcription start site region 33177
Tssr29029 3 50616036 to 50616060 24 + TSS region transcription start site region 29029
Gm37199 3 50624347 to 50628411 4064 - unclassified gene predicted gene, 37199
Tssr33178 3 50628377 to 50628390 13 - TSS region transcription start site region 33178
Tssr33179 3 50628405 to 50628419 14 - TSS region transcription start site region 33179
Tssr33180 3 50628433 to 50628472 39 - TSS region transcription start site region 33180
Tssr33181 3 50628485 to 50628508 23 - TSS region transcription start site region 33181
Tssr33182 3 50628519 to 50628534 15 - TSS region transcription start site region 33182
Tssr33183 3 50637423 to 50637428 5 - TSS region transcription start site region 33183
Gm37461 3 50679698 to 50683401 3703 - unclassified gene predicted gene, 37461
Tssr33184 3 50683398 to 50683401 3 - TSS region transcription start site region 33184
D3Mit65 3 50684878 to 50684998 120 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 65
Tssr33185 3 50687306 to 50687309 3 - TSS region transcription start site region 33185
Gm40043 3 50706901 to 50711888 4987 - lncRNA gene predicted gene, 40043
Gm24503 3 50838581 to 50838715 134 - snoRNA gene predicted gene, 24503
D3Mit5 3 50844624 to 50844807 183 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 5
Afw13 3 50844624 to 50844807 183 QTL abdominal fat weight QTL 13
Bwtq13 3 50844624 to 50844807 183 QTL body weight QTL 13
Gm37548 3 50883246 to 50887059 3813 - lncRNA gene predicted gene, 37548
Tssr33186 3 50887009 to 50887022 13 - TSS region transcription start site region 33186
Tssr33187 3 50887053 to 50887064 11 - TSS region transcription start site region 33187
Tssr33188 3 50888441 to 50888471 30 - TSS region transcription start site region 33188
Tssr29030 3 50901029 to 50901064 35 + TSS region transcription start site region 29030
Cpgi13130 3 50905988 to 50906320 332 CpG island CpG island 13130
Gm37843 3 50918887 to 50921525 2638 - unclassified gene predicted gene, 37843