Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Mos3 | 3 | 20291792 | heritable phenotypic marker | modifier of Sox10 3 | ||
Pcdh18 | 3 | 14029 | - | protein coding gene | protocadherin 18 | |
Tssr33097 | 3 | 2 | - | TSS region | transcription start site region 33097 | |
Cpgi13128 | 3 | 336 | CpG island | CpG island 13128 | ||
Cpgi13129 | 3 | 609 | CpG island | CpG island 13129 | ||
Tssr33098 | 3 | 30 | - | TSS region | transcription start site region 33098 | |
Tssr33099 | 3 | 9 | - | TSS region | transcription start site region 33099 | |
Tssr33100 | 3 | 51 | - | TSS region | transcription start site region 33100 | |
Tssr867 | 3 | 7 | - | TSS region | transcription start site region 867 | |
Tssr868 | 3 | 7 | - | TSS region | transcription start site region 868 | |
Gm37550 | 3 | 462 | - | pseudogene | predicted gene, 37550 | |
Gm37854 | 3 | 8811 | + | antisense lncRNA gene | predicted gene, 37854 | |
Gm40042 | 3 | 14470 | - | lncRNA gene | predicted gene, 40042 | |
Gm37826 | 3 | 321 | + | pseudogene | predicted gene, 37826 | |
D3Mit64 | 3 | 129 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 64 | ||
Gm37692 | 3 | 231 | - | pseudogene | predicted gene, 37692 | |
Tssr869 | 3 | 1 | + | TSS region | transcription start site region 869 | |
Gm2345 | 3 | 588 | + | pseudogene | predicted gene 2345 | |
Tpcq1 | 3 | 2000000 | QTL | total plasma cholesterol QTL 1 | ||
Slc7a11 | 3 | 134151 | - | protein coding gene | solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 | |
Tssr33101 | 3 | 18 | - | TSS region | transcription start site region 33101 | |
Tssr33102 | 3 | 20 | - | TSS region | transcription start site region 33102 | |
Tssr33103 | 3 | 10 | - | TSS region | transcription start site region 33103 | |
Tssr33104 | 3 | 12 | - | TSS region | transcription start site region 33104 | |
Tssr33105 | 3 | 35 | - | TSS region | transcription start site region 33105 | |
Tssr33106 | 3 | 12 | - | TSS region | transcription start site region 33106 | |
Tssr33107 | 3 | 12 | - | TSS region | transcription start site region 33107 | |
Tssr33108 | 3 | 18 | - | TSS region | transcription start site region 33108 | |
Tssr33109 | 3 | 11 | - | TSS region | transcription start site region 33109 | |
Tssr33110 | 3 | 24 | - | TSS region | transcription start site region 33110 | |
Tssr33111 | 3 | 13 | - | TSS region | transcription start site region 33111 | |
Tssr33112 | 3 | 13 | - | TSS region | transcription start site region 33112 | |
Tssr33113 | 3 | 11 | - | TSS region | transcription start site region 33113 | |
Tssr33114 | 3 | 36 | - | TSS region | transcription start site region 33114 | |
Tssr33115 | 3 | 17 | - | TSS region | transcription start site region 33115 | |
Tssr33116 | 3 | 17 | - | TSS region | transcription start site region 33116 | |
Tssr33117 | 3 | 12 | - | TSS region | transcription start site region 33117 | |
Tssr33118 | 3 | 18 | - | TSS region | transcription start site region 33118 | |
Tssr33119 | 3 | 11 | - | TSS region | transcription start site region 33119 | |
Tssr33120 | 3 | 12 | - | TSS region | transcription start site region 33120 | |
Tssr33121 | 3 | 12 | - | TSS region | transcription start site region 33121 | |
Tssr33122 | 3 | 48 | - | TSS region | transcription start site region 33122 | |
Tssr33123 | 3 | 13 | - | TSS region | transcription start site region 33123 | |
Tssr33124 | 3 | 22 | - | TSS region | transcription start site region 33124 | |
Tssr33125 | 3 | 4 | - | TSS region | transcription start site region 33125 | |
Tssr33126 | 3 | 5 | - | TSS region | transcription start site region 33126 | |
Tssr33127 | 3 | 18 | - | TSS region | transcription start site region 33127 | |
Tssr33128 | 3 | 43 | - | TSS region | transcription start site region 33128 | |
Gm37498 | 3 | 4001 | - | unclassified gene | predicted gene, 37498 | |
Tssr33129 | 3 | 14 | - | TSS region | transcription start site region 33129 | |
Tssr870 | 3 | 11 | + | TSS region | transcription start site region 870 | |
Tssr33130 | 3 | 38 | - | TSS region | transcription start site region 33130 | |
Tssr33131 | 3 | 4 | - | TSS region | transcription start site region 33131 | |
Tssr29022 | 3 | 11 | + | TSS region | transcription start site region 29022 | |
Tssr871 | 3 | 11 | + | TSS region | transcription start site region 871 | |
Tssr33132 | 3 | 4 | - | TSS region | transcription start site region 33132 | |
Tssr33133 | 3 | 10 | - | TSS region | transcription start site region 33133 | |
Tssr29023 | 3 | 13 | + | TSS region | transcription start site region 29023 | |
Tssr33134 | 3 | 12 | - | TSS region | transcription start site region 33134 | |
Tssr33135 | 3 | 11 | - | TSS region | transcription start site region 33135 | |
Tssr33136 | 3 | 10 | - | TSS region | transcription start site region 33136 | |
Tssr33137 | 3 | 39 | - | TSS region | transcription start site region 33137 | |
Tssr33138 | 3 | 14 | - | TSS region | transcription start site region 33138 | |
Tssr33139 | 3 | 17 | - | TSS region | transcription start site region 33139 | |
Tssr33140 | 3 | 11 | - | TSS region | transcription start site region 33140 | |
Tssr33141 | 3 | 11 | - | TSS region | transcription start site region 33141 | |
Tssr33142 | 3 | 19 | - | TSS region | transcription start site region 33142 | |
Tssr33143 | 3 | 8 | - | TSS region | transcription start site region 33143 | |
Tssr872 | 3 | 3 | - | TSS region | transcription start site region 872 | |
Tssr33144 | 3 | 15 | - | TSS region | transcription start site region 33144 | |
Tssr29024 | 3 | 30 | + | TSS region | transcription start site region 29024 | |
Tssr33145 | 3 | 15 | - | TSS region | transcription start site region 33145 | |
Tssr33146 | 3 | 13 | - | TSS region | transcription start site region 33146 | |
Tssr33147 | 3 | 11 | - | TSS region | transcription start site region 33147 | |
Tssr33148 | 3 | 13 | - | TSS region | transcription start site region 33148 | |
Tssr33149 | 3 | 12 | - | TSS region | transcription start site region 33149 | |
Tssr33150 | 3 | 13 | - | TSS region | transcription start site region 33150 | |
Tssr33151 | 3 | 13 | - | TSS region | transcription start site region 33151 | |
Tssr33152 | 3 | 21 | - | TSS region | transcription start site region 33152 | |
Tssr33153 | 3 | 4 | - | TSS region | transcription start site region 33153 | |
Tssr33154 | 3 | 4 | - | TSS region | transcription start site region 33154 | |
Tssr33155 | 3 | 11 | - | TSS region | transcription start site region 33155 | |
Tssr33156 | 3 | 16 | - | TSS region | transcription start site region 33156 | |
Tssr33157 | 3 | 10 | - | TSS region | transcription start site region 33157 | |
Tssr33158 | 3 | 27 | - | TSS region | transcription start site region 33158 | |
Tssr33159 | 3 | 22 | - | TSS region | transcription start site region 33159 | |
Tssr29025 | 3 | 5 | + | TSS region | transcription start site region 29025 | |
Tssr33160 | 3 | 5 | - | TSS region | transcription start site region 33160 | |
Tssr33161 | 3 | 13 | - | TSS region | transcription start site region 33161 | |
Tssr33162 | 3 | 13 | - | TSS region | transcription start site region 33162 | |
Tssr33163 | 3 | 11 | - | TSS region | transcription start site region 33163 | |
Tssr33164 | 3 | 12 | - | TSS region | transcription start site region 33164 | |
Tssr33165 | 3 | 21 | - | TSS region | transcription start site region 33165 | |
Tssr29026 | 3 | 33 | + | TSS region | transcription start site region 29026 | |
Tssr33166 | 3 | 19 | - | TSS region | transcription start site region 33166 | |
Tssr33167 | 3 | 2 | - | TSS region | transcription start site region 33167 | |
Tssr33168 | 3 | 7 | - | TSS region | transcription start site region 33168 | |
Tssr33169 | 3 | 9 | - | TSS region | transcription start site region 33169 | |
Tssr33170 | 3 | 13 | - | TSS region | transcription start site region 33170 | |
Tssr873 | 3 | 28 | + | TSS region | transcription start site region 873 | |
Tssr33171 | 3 | 8 | - | TSS region | transcription start site region 33171 | |
Tssr33172 | 3 | 10 | - | TSS region | transcription start site region 33172 | |
Tssr33173 | 3 | 14 | - | TSS region | transcription start site region 33173 | |
Tssr33174 | 3 | 12 | - | TSS region | transcription start site region 33174 | |
Tssr29027 | 3 | 6 | + | TSS region | transcription start site region 29027 | |
Tssr33175 | 3 | 2 | - | TSS region | transcription start site region 33175 | |
Gm6209 | 3 | 69821 | - | unclassified non-coding RNA gene | predicted gene 6209 | |
5830415G21Rik | 3 | 1331 | - | unclassified gene | RIKEN cDNA 5830415G21 gene | |
D3Mit182 | 3 | 150 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 182 | ||
Ssen2 | 3 | 150 | QTL | suseptibility to Sendai virus 2 | ||
Gm38237 | 3 | 375 | - | pseudogene | predicted gene, 38237 | |
Tssr29028 | 3 | 5 | + | TSS region | transcription start site region 29028 | |
Tssr33176 | 3 | 12 | - | TSS region | transcription start site region 33176 | |
Tssr33177 | 3 | 10 | - | TSS region | transcription start site region 33177 | |
Tssr29029 | 3 | 24 | + | TSS region | transcription start site region 29029 | |
Gm37199 | 3 | 4064 | - | unclassified gene | predicted gene, 37199 | |
Tssr33178 | 3 | 13 | - | TSS region | transcription start site region 33178 | |
Tssr33179 | 3 | 14 | - | TSS region | transcription start site region 33179 | |
Tssr33180 | 3 | 39 | - | TSS region | transcription start site region 33180 | |
Tssr33181 | 3 | 23 | - | TSS region | transcription start site region 33181 | |
Tssr33182 | 3 | 15 | - | TSS region | transcription start site region 33182 | |
Tssr33183 | 3 | 5 | - | TSS region | transcription start site region 33183 | |
Gm37461 | 3 | 3703 | - | unclassified gene | predicted gene, 37461 | |
Tssr33184 | 3 | 3 | - | TSS region | transcription start site region 33184 | |
D3Mit65 | 3 | 120 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 65 | ||
Tssr33185 | 3 | 3 | - | TSS region | transcription start site region 33185 | |
Gm40043 | 3 | 4987 | - | lncRNA gene | predicted gene, 40043 | |
Gm24503 | 3 | 134 | - | snoRNA gene | predicted gene, 24503 | |
Afw13 | 3 | 183 | QTL | abdominal fat weight QTL 13 | ||
Bwtq13 | 3 | 183 | QTL | body weight QTL 13 | ||
D3Mit5 | 3 | 183 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 5 | ||
Gm37548 | 3 | 3813 | - | lncRNA gene | predicted gene, 37548 | |
Tssr33186 | 3 | 13 | - | TSS region | transcription start site region 33186 | |
Tssr33187 | 3 | 11 | - | TSS region | transcription start site region 33187 | |
Tssr33188 | 3 | 30 | - | TSS region | transcription start site region 33188 | |
Tssr29030 | 3 | 35 | + | TSS region | transcription start site region 29030 | |
Cpgi13130 | 3 | 332 | CpG island | CpG island 13130 | ||
Gm37843 | 3 | 2638 | - | unclassified gene | predicted gene, 37843 | |
AA672641 | 3 | 206 | unclassified gene | expressed sequence AA672641 | ||
Gm37209 | 3 | 1275 | - | unclassified gene | predicted gene, 37209 | |
D3Mit362 | 3 | 196 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology-362 | ||
Gm35756 | 3 | 9487 | - | lncRNA gene | predicted gene, 35756 | |
Gm29230 | 3 | 15946 | - | lincRNA gene | predicted gene 29230 | |
Gm38246 | 3 | 1510 | + | lincRNA gene | predicted gene, 38246 | |
Tssr874 | 3 | 2 | + | TSS region | transcription start site region 874 | |
Gm35891 | 3 | 2248 | - | lncRNA gene | predicted gene, 35891 | |
Tssr33189 | 3 | 14 | - | TSS region | transcription start site region 33189 | |
Tssr29031 | 3 | 11 | + | TSS region | transcription start site region 29031 | |
Tssr29032 | 3 | 28 | + | TSS region | transcription start site region 29032 | |
Tssr29033 | 3 | 5 | + | TSS region | transcription start site region 29033 | |
Tssr29034 | 3 | 7 | + | TSS region | transcription start site region 29034 | |
Tssr33190 | 3 | 5 | - | TSS region | transcription start site region 33190 | |
Tssr33191 | 3 | 12 | - | TSS region | transcription start site region 33191 | |
Gm40044 | 3 | 1859 | - | lncRNA gene | predicted gene, 40044 | |
Tssr29035 | 3 | 11 | + | TSS region | transcription start site region 29035 | |
Tssr29036 | 3 | 8 | + | TSS region | transcription start site region 29036 | |
Tssr29037 | 3 | 14 | + | TSS region | transcription start site region 29037 | |
Tssr33192 | 3 | 38 | - | TSS region | transcription start site region 33192 | |
Tssr29038 | 3 | 17 | + | TSS region | transcription start site region 29038 | |
Tssr29039 | 3 | 13 | + | TSS region | transcription start site region 29039 | |
Cpgi13131 | 3 | 1380 | CpG island | CpG island 13131 | ||
Noct | 3 | 27197 | + | protein coding gene | nocturnin | |
Tssr29040 | 3 | 14 | + | TSS region | transcription start site region 29040 | |
Tssr29041 | 3 | 13 | + | TSS region | transcription start site region 29041 | |
Tssr29042 | 3 | 15 | + | TSS region | transcription start site region 29042 | |
Tssr33193 | 3 | 29 | - | TSS region | transcription start site region 33193 | |
Tssr29043 | 3 | 20 | + | TSS region | transcription start site region 29043 | |
Tssr29044 | 3 | 13 | + | TSS region | transcription start site region 29044 | |
Tssr29045 | 3 | 29 | + | TSS region | transcription start site region 29045 | |
Tssr29046 | 3 | 5 | + | TSS region | transcription start site region 29046 | |
Gm38357 | 3 | 2463 | + | unclassified gene | predicted gene, 38357 | |
Tssr29047 | 3 | 2 | + | TSS region | transcription start site region 29047 | |
Elf2 | 3 | 87943 | - | protein coding gene | E74-like factor 2 | |
Cpgi13132 | 3 | 1924 | CpG island | CpG island 13132 | ||
Tssr33194 | 3 | 34 | - | TSS region | transcription start site region 33194 | |
Tssr29048 | 3 | 17 | + | TSS region | transcription start site region 29048 | |
4930577N17Rik | 3 | 1624 | + | lncRNA gene | RIKEN cDNA 4930577N17 gene | |
Tssr29049 | 3 | 16 | + | TSS region | transcription start site region 29049 | |
Tssr33195 | 3 | 29 | - | TSS region | transcription start site region 33195 | |
Tssr33196 | 3 | 132 | - | TSS region | transcription start site region 33196 | |
Tssr33197 | 3 | 15 | - | TSS region | transcription start site region 33197 | |
Gm24282 | 3 | 65 | + | miRNA gene | predicted gene, 24282 | |
Gm37399 | 3 | 415 | - | unclassified gene | predicted gene, 37399 | |
D3Mit274 | 3 | 107 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 274 | ||
Tssr33198 | 3 | 9 | - | TSS region | transcription start site region 33198 | |
Cpgi13133 | 3 | 2515 | CpG island | CpG island 13133 | ||
Tssr29050 | 3 | 27 | + | TSS region | transcription start site region 29050 | |
Tssr29051 | 3 | 10 | + | TSS region | transcription start site region 29051 | |
Tssr33199 | 3 | 7 | - | TSS region | transcription start site region 33199 | |
Tssr33200 | 3 | 10 | - | TSS region | transcription start site region 33200 | |
Tssr33201 | 3 | 11 | - | TSS region | transcription start site region 33201 | |
Tssr33202 | 3 | 29 | - | TSS region | transcription start site region 33202 | |
Tssr33203 | 3 | 53 | - | TSS region | transcription start site region 33203 | |
Tssr33204 | 3 | 3 | - | TSS region | transcription start site region 33204 | |
Tssr29052 | 3 | 42 | + | TSS region | transcription start site region 29052 | |
n-TPtgg7 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA proline 7 (anticodon TGG) | |
Cpgi13134 | 3 | 586 | CpG island | CpG island 13134 | ||
n-TPagg5 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA proline 5 (anticodon AGG) | |
Cpgi13135 | 3 | 361 | CpG island | CpG island 13135 | ||
Gm37203 | 3 | 384 | + | pseudogene | predicted gene, 37203 |