Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:47380972-49101090

Filter by:
26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit96 3 47420722 to 47420931 209 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 96
Gm2229 3 47459607 to 47460302 695 - pseudogene predicted gene 2229
Opfdc2 3 47471285 to 47471285 0 QTL open field distance from center 2
D3Mit227 3 47519918 to 47520042 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 227
Tssr29013 3 47704569 to 47704572 3 + TSS region transcription start site region 29013
Gm7977 3 48026012 to 48026759 747 - pseudogene predicted gene 7977
Gm37295 3 48078341 to 48078449 108 + unclassified gene predicted gene, 37295
Tssr29014 3 48123499 to 48123500 1 + TSS region transcription start site region 29014
D3Mit296 3 48240972 to 48241090 118 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 296
Gm46835 3 48546416 to 48579470 33054 + lncRNA gene predicted gene, 46835
1700018B24Rik 3 48605731 to 48609100 3369 - lincRNA gene RIKEN cDNA 1700018B24 gene
Cpgi13126 3 48608832 to 48609161 329 CpG island CpG island 13126
Tssr33093 3 48609063 to 48609074 11 - TSS region transcription start site region 33093
Tssr33094 3 48609080 to 48609111 31 - TSS region transcription start site region 33094
Tssr33095 3 48609122 to 48609133 11 - TSS region transcription start site region 33095
Gm37190 3 48748510 to 48760949 12439 - lincRNA gene predicted gene, 37190
D3Mit6 3 48883405 to 48883548 143 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 6
Bh4p 3 48883405 to 48883548 143 QTL bar holding four paws
Gm23511 3 48954722 to 48954885 163 + snRNA gene predicted gene, 23511
Tssr29015 3 48954723 to 48954724 1 + TSS region transcription start site region 29015
Tssr866 3 49051270 to 49051272 2 + TSS region transcription start site region 866
Tssr29016 3 49062355 to 49062370 15 + TSS region transcription start site region 29016
Gm31415 3 49062378 to 49085259 22881 + lincRNA gene predicted gene, 31415
Tssr29017 3 49062422 to 49062432 10 + TSS region transcription start site region 29017
Tssr29018 3 49062434 to 49062442 8 + TSS region transcription start site region 29018
Tssr29019 3 49062448 to 49062460 12 + TSS region transcription start site region 29019