Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:41066061-41510590

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgrmc2 3 41066326 to 41083046 16720 - protein coding gene progesterone receptor membrane component 2
D3Mit326 3 41069167 to 41069297 130 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology-326
Tssr33070 3 41075189 to 41075194 5 - TSS region transcription start site region 33070
Cpgi13116 3 41082278 to 41083818 1540 CpG island CpG island 13116
Tssr33071 3 41082937 to 41082948 11 - TSS region transcription start site region 33071
Tssr33072 3 41082992 to 41083024 32 - TSS region transcription start site region 33072
Tssr28988 3 41083429 to 41083449 20 + TSS region transcription start site region 28988
Tssr28989 3 41090018 to 41090026 8 + TSS region transcription start site region 28989
Tssr28990 3 41107920 to 41107933 13 + TSS region transcription start site region 28990
Gm40038 3 41163048 to 41172663 9615 - lincRNA gene predicted gene, 40038
Gm16508 3 41286061 to 41290590 4529 - lincRNA gene predicted gene 16508
Tssr28991 3 41354141 to 41354163 22 + TSS region transcription start site region 28991
1700052H01Rik 3 41354147 to 41393589 39442 + lincRNA gene RIKEN cDNA 1700052H01 gene
Tssr28992 3 41408745 to 41408766 21 + TSS region transcription start site region 28992
Tssr33073 3 41423463 to 41423468 5 - TSS region transcription start site region 33073
Gm25487 3 41441343 to 41441467 124 - snoRNA gene predicted gene, 25487
Tssr33074 3 41467358 to 41467397 39 - TSS region transcription start site region 33074
Gm40040 3 41477577 to 41482391 4814 - lincRNA gene predicted gene, 40040
Gm6069 3 41485733 to 41486195 462 + pseudogene predicted gene 6069
Platr4 3 41487681 to 41493199 5518 - lincRNA gene pluripotency associated transcript 4
Tssr33075 3 41493177 to 41493202 25 - TSS region transcription start site region 33075
Tssr28993 3 41493359 to 41493364 5 + TSS region transcription start site region 28993
Tssr33076 3 41494896 to 41494905 9 - TSS region transcription start site region 33076
Tssr33077 3 41494944 to 41494951 7 - TSS region transcription start site region 33077
Tssr28994 3 41495290 to 41495296 6 + TSS region transcription start site region 28994
Tssr28995 3 41496202 to 41496231 29 + TSS region transcription start site region 28995
Tssr33078 3 41497026 to 41497047 21 - TSS region transcription start site region 33078
Tssr33079 3 41497059 to 41497075 16 - TSS region transcription start site region 33079
Tssr28996 3 41497249 to 41497259 10 + TSS region transcription start site region 28996