MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:38957131-39625932

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fat4	3	38886940 to 39011985	125045	+	protein coding gene	FAT atypical cadherin 4
Cpgi13106	3	38983491 to 38983765	274		CpG island	CpG island 13106
Gm43539	3	39008602 to 39009681	1079	-	antisense lncRNA gene	predicted gene 43539
Tssr33061	3	39009700 to 39009708	8	-	TSS region	transcription start site region 33061
Tssr28938	3	39009826 to 39009838	12	+	TSS region	transcription start site region 28938
Tssr28939	3	39011789 to 39011793	4	+	TSS region	transcription start site region 28939
D3Mit3	3	39047078 to 39047179	101		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 3
Gm43308	3	39128533 to 39128905	372	-	pseudogene	predicted gene 43308
Gm30011	3	39150832 to 39159670	8838	-	lncRNA gene	predicted gene, 30011
Gm43008	3	39217561 to 39217846	285	-	pseudogene	predicted gene 43008
Gm42214	3	39277131 to 39305932	28801	+	lncRNA gene	predicted gene, 42214
Gm9845	3	39358306 to 39358903	597	-	pseudogene	predicted pseudogene 9845
Tssr33062	3	39359156 to 39359160	4	-	TSS region	transcription start site region 33062
Tssr28940	3	39364563 to 39364565	2	+	TSS region	transcription start site region 28940
Gm20566	3	39443893 to 39444348	455	+	pseudogene	predicted gene, 20566
Gm30063	3	39460780 to 39598651	137871	+	lncRNA gene	predicted gene, 30063
Gm42215	3	39525522 to 39534150	8628	-	lncRNA gene	predicted gene, 42215
Tssr33063	3	39533910 to 39533921	11	-	TSS region	transcription start site region 33063
D3Mit307	3	39539052 to 39539157	105		DNA segment	DNA Segment, Chr 3, Massachusetts Institute of Technology 307