MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:38216152-38518881

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm2965	3	38223451 to 38223793	342	+	pseudogene	predicted gene 2965
Tssr28927	3	38223563 to 38223575	12	+	TSS region	transcription start site region 28927
Cpgi13103	3	38228268 to 38228485	217		CpG island	CpG island 13103
Gm17955	3	38254024 to 38254803	779	+	pseudogene	predicted gene, 17955
Tssr862	3	38258857 to 38258860	3	+	TSS region	transcription start site region 862
Gm25574	3	38267836 to 38268084	248	-	unclassified non-coding RNA gene	predicted gene, 25574
D3Nds44	3	38296336 to 38296501	165		DNA segment	DNA segment, Chr 3, Nuffield Department of Surgery 44
Gm42213	3	38366152 to 38368881	2729	-	lncRNA gene	predicted gene, 42213
Gm42920	3	38369398 to 38373636	4238	+	lincRNA gene	predicted gene 42920
3830422I06Rik	3	38418971 to 38420151	1180	-	unclassified gene	RIKEN cDNA 3830422I06 gene
Gm36823	3	38427135 to 38443874	16739	-	lincRNA gene	predicted gene, 36823
Tssr28928	3	38438657 to 38438658	1	+	TSS region	transcription start site region 28928
Gm7815	3	38438962 to 38439793	831	-	pseudogene	predicted gene 7815
Ankrd50	3	38449259 to 38484844	35585	-	protein coding gene	ankyrin repeat domain 50
Cpgi13104	3	38484295 to 38485406	1111		CpG island	CpG island 13104
Tssr33057	3	38484779 to 38484791	12	-	TSS region	transcription start site region 33057
Tssr33058	3	38484802 to 38484822	20	-	TSS region	transcription start site region 33058
Tssr33059	3	38484831 to 38484864	33	-	TSS region	transcription start site region 33059
Tssr28929	3	38485195 to 38485211	16	+	TSS region	transcription start site region 28929