Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:37331419-37631575

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43439 3 37312519 to 37404866 92347 + unclassified non-coding RNA gene predicted gene 43439
Fgf2os 3 37335332 to 37349740 14408 - antisense lncRNA gene fibroblast growth factor 2, opposite strand
Gm43488 3 37339017 to 37341520 2503 + unclassified gene predicted gene 43488
Cpgi13096 3 37348209 to 37349431 1222 CpG island CpG island 13096
Fgf2 3 37348477 to 37404893 56416 + protein coding gene fibroblast growth factor 2
Tssr28895 3 37348485 to 37348493 8 + TSS region transcription start site region 28895
Tssr28896 3 37348645 to 37348716 71 + TSS region transcription start site region 28896
D3Nds51 3 37349659 to 37349933 274 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 51
Tssr28897 3 37365451 to 37365452 1 + TSS region transcription start site region 28897
Tssr28898 3 37366881 to 37366895 14 + TSS region transcription start site region 28898
D3Nds34 3 37373320 to 37373516 196 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 34
Gm42923 3 37392206 to 37395101 2895 - unclassified gene predicted gene 42923
Nudt6 3 37404982 to 37420186 15204 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 6
Cpgi13097 3 37418975 to 37421080 2105 CpG island CpG island 13097
Tssr33052 3 37419573 to 37419605 32 - TSS region transcription start site region 33052
Spata5 3 37419950 to 37579096 159146 + protein coding gene spermatogenesis associated 5
Tssr28899 3 37420257 to 37420272 15 + TSS region transcription start site region 28899
Tssr28900 3 37420273 to 37420335 62 + TSS region transcription start site region 28900
Tssr28901 3 37420341 to 37420356 15 + TSS region transcription start site region 28901
Tssr28902 3 37420398 to 37420407 9 + TSS region transcription start site region 28902
D3Nds46 3 37472213 to 37472329 116 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 46
Tssr28903 3 37481353 to 37481372 19 + TSS region transcription start site region 28903
Tssr28904 3 37481416 to 37481440 24 + TSS region transcription start site region 28904
Cpgi13098 3 37481419 to 37481575 156 CpG island CpG island 13098
Tssr28905 3 37481470 to 37481493 23 + TSS region transcription start site region 28905
Tssr28906 3 37481559 to 37481570 11 + TSS region transcription start site region 28906
Gm43484 3 37488827 to 37494792 5965 + unclassified gene predicted gene 43484
Gm36412 3 37541876 to 37602389 60513 - lncRNA gene predicted gene, 36412
D3Ertd740e 3 37549108 to 37549335 227 DNA segment DNA segment, Chr 3, ERATO Doi 740, expressed
Gm12564 3 37556183 to 37556503 320 - pseudogene predicted gene 12564
Gm12565 3 37599427 to 37600072 645 - pseudogene predicted gene 12565
Tssr33053 3 37600237 to 37600244 7 - TSS region transcription start site region 33053
Cpgi13099 3 37605840 to 37606075 235 CpG island CpG island 13099
Tssr28907 3 37613911 to 37613927 16 + TSS region transcription start site region 28907
4930594O21Rik 3 37613913 to 37615276 1363 + lincRNA gene RIKEN cDNA 4930594O21 gene