Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:36623166-37103177

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jobes1b 3 36480000 to 36850000 370000 QTL juvenile obesity 1b
Trpc3 3 36620482 to 36690167 69685 - protein coding gene transient receptor potential cation channel, subfamily C, member 3
Cpgi13089 3 36649963 to 36650276 313 CpG island CpG island 13089
Gm35856 3 36654065 to 36655011 946 - lncRNA gene predicted gene, 35856
Cpgi13090 3 36670845 to 36671735 890 CpG island CpG island 13090
Cpgi13091 3 36688933 to 36690589 1656 CpG island CpG island 13091
Tssr33044 3 36690118 to 36690172 54 - TSS region transcription start site region 33044
Gm12377 3 36694802 to 36695053 251 - pseudogene predicted gene 12377
D3Nds65 3 36709996 to 36710147 151 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 65
D3Nds64 3 36742861 to 36742997 136 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 64
Gm12376 3 36824352 to 36824958 606 - pseudogene predicted gene 12376
Tssr28876 3 36861995 to 36862011 16 + TSS region transcription start site region 28876
Tssr28877 3 36862014 to 36862040 26 + TSS region transcription start site region 28877
Cpgi13092 3 36862783 to 36863591 808 CpG island CpG island 13092
Tssr28878 3 36863102 to 36863147 45 + TSS region transcription start site region 28878
4932438A13Rik 3 36863104 to 37053033 189929 + protein coding gene RIKEN cDNA 4932438A13 gene
Tssr28879 3 36863148 to 36863164 16 + TSS region transcription start site region 28879
Tssr28880 3 36863166 to 36863177 11 + TSS region transcription start site region 28880
Tssr28881 3 36863179 to 36863190 11 + TSS region transcription start site region 28881
Tssr28882 3 36942381 to 36942411 30 + TSS region transcription start site region 28882
Tssr28883 3 37044238 to 37044244 6 + TSS region transcription start site region 28883
D3Nds47 3 37045899 to 37046065 166 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 47
Gm12531 3 37052215 to 37060035 7820 - antisense lncRNA gene predicted gene 12531
D3Nds50 3 37058589 to 37058639 50 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 50
Tssr28884 3 37062799 to 37062818 19 + TSS region transcription start site region 28884
Tssr28885 3 37063042 to 37063049 7 + TSS region transcription start site region 28885
Cpgi13093 3 37063148 to 37063905 757 CpG island CpG island 13093
Adad1 3 37063527 to 37121930 58403 + protein coding gene adenosine deaminase domain containing 1 (testis specific)
Tssr28886 3 37063612 to 37063616 4 + TSS region transcription start site region 28886
Tssr28887 3 37063631 to 37063639 8 + TSS region transcription start site region 28887
Tssr28888 3 37063644 to 37063672 28 + TSS region transcription start site region 28888
Tssr28889 3 37063674 to 37063697 23 + TSS region transcription start site region 28889
Tssr28890 3 37063698 to 37063700 2 + TSS region transcription start site region 28890
Tssr28891 3 37063704 to 37063715 11 + TSS region transcription start site region 28891
Gm12582 3 37077655 to 37078351 696 + pseudogene predicted gene 12582