Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:36513489-36713500

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11549	3	36515057 to 36521445	6388	-	lincRNA gene	predicted gene 11549
Cpgi13084	3	36521107 to 36521922	815		CpG island	CpG island 13084
Tssr33032	3	36521391 to 36521416	25	-	TSS region	transcription start site region 33032
Tssr33033	3	36521809 to 36521820	11	-	TSS region	transcription start site region 33033
Gm43537	3	36529222 to 36532331	3109	-	unclassified gene	predicted gene 43537
Cpgi13085	3	36532180 to 36532348	168		CpG island	CpG island 13085
Gm11550	3	36539383 to 36540081	698	-	pseudogene	predicted gene 11550
Cpgi13086	3	36552394 to 36552975	581		CpG island	CpG island 13086
Tssr28873	3	36552600 to 36552677	77	+	TSS region	transcription start site region 28873
Exosc9	3	36552606 to 36565727	13121	+	protein coding gene	exosome component 9
Ccna2	3	36564865 to 36572150	7285	-	protein coding gene	cyclin A2
Tssr33034	3	36565310 to 36565315	5	-	TSS region	transcription start site region 33034
D3Nds36	3	36565461 to 36565672	211		DNA segment	DNA segment, Chr 3, Nuffield Department of Surgery 36
Tssr33035	3	36567904 to 36567928	24	-	TSS region	transcription start site region 33035
Cpgi13087	3	36571263 to 36572429	1166		CpG island	CpG island 13087
Tssr33036	3	36571918 to 36571931	13	-	TSS region	transcription start site region 33036
Tssr33037	3	36571952 to 36572003	51	-	TSS region	transcription start site region 33037
Bbs7	3	36573142 to 36613477	40335	-	protein coding gene	Bardet-Biedl syndrome 7 (human)
Tssr33038	3	36599411 to 36599440	29	-	TSS region	transcription start site region 33038
Cpgi13088	3	36613096 to 36613650	554		CpG island	CpG island 13088
Tssr33039	3	36613339 to 36613367	28	-	TSS region	transcription start site region 33039
Tssr33040	3	36613370 to 36613397	27	-	TSS region	transcription start site region 33040
Tssr33041	3	36613418 to 36613429	11	-	TSS region	transcription start site region 33041
Tssr33042	3	36613461 to 36613471	10	-	TSS region	transcription start site region 33042
Tssr28874	3	36613482 to 36613486	4	+	TSS region	transcription start site region 28874
Tssr33043	3	36613489 to 36613500	11	-	TSS region	transcription start site region 33043
Tssr28875	3	36616892 to 36616901	9	+	TSS region	transcription start site region 28875
Trpc3	3	36620482 to 36690167	69685	-	protein coding gene	transient receptor potential cation channel, subfamily C, member 3
Cpgi13089	3	36649963 to 36650276	313		CpG island	CpG island 13089
Gm35856	3	36654065 to 36655011	946	-	lncRNA gene	predicted gene, 35856
Cpgi13090	3	36670845 to 36671735	890		CpG island	CpG island 13090
Cpgi13091	3	36688933 to 36690589	1656		CpG island	CpG island 13091
Tssr33044	3	36690118 to 36690172	54	-	TSS region	transcription start site region 33044
Gm12377	3	36694802 to 36695053	251	-	pseudogene	predicted gene 12377
D3Nds65	3	36709996 to 36710147	151		DNA segment	DNA segment, Chr 3, Nuffield Department of Surgery 65