Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Anxa5 | 3 | 26964 | - | protein coding gene | annexin A5 | |
Tssr33024 | 3 | 40 | - | TSS region | transcription start site region 33024 | |
Tssr28867 | 3 | 31 | + | TSS region | transcription start site region 28867 | |
Tssr33025 | 3 | 54 | - | TSS region | transcription start site region 33025 | |
Tssr28868 | 3 | 59 | + | TSS region | transcription start site region 28868 | |
Tssr33026 | 3 | 30 | - | TSS region | transcription start site region 33026 | |
Tssr28869 | 3 | 11 | + | TSS region | transcription start site region 28869 | |
Tssr33027 | 3 | 28 | - | TSS region | transcription start site region 33027 | |
Tssr33028 | 3 | 13 | - | TSS region | transcription start site region 33028 | |
Tssr28870 | 3 | 8 | + | TSS region | transcription start site region 28870 | |
Tssr33029 | 3 | 4 | - | TSS region | transcription start site region 33029 | |
Cpgi13083 | 3 | 930 | CpG island | CpG island 13083 | ||
Mir7009 | 3 | 63 | - | miRNA gene | microRNA 7009 | |
Tssr33030 | 3 | 71 | - | TSS region | transcription start site region 33030 | |
Tssr33031 | 3 | 17 | - | TSS region | transcription start site region 33031 | |
Tssr28871 | 3 | 27 | + | TSS region | transcription start site region 28871 | |
1810062G17Rik | 3 | 6362 | + | protein coding gene | RIKEN cDNA 1810062G17 gene | |
Tssr28872 | 3 | 35 | + | TSS region | transcription start site region 28872 | |
Jobes1b | 3 | 370000 | QTL | juvenile obesity 1b | ||
Gm11548 | 3 | 7005 | - | lincRNA gene | predicted gene 11548 | |
Gm11549 | 3 | 6388 | - | lincRNA gene | predicted gene 11549 | |
Cpgi13084 | 3 | 815 | CpG island | CpG island 13084 | ||
Tssr33032 | 3 | 25 | - | TSS region | transcription start site region 33032 | |
Tssr33033 | 3 | 11 | - | TSS region | transcription start site region 33033 | |
Gm43537 | 3 | 3109 | - | unclassified gene | predicted gene 43537 | |
Cpgi13085 | 3 | 168 | CpG island | CpG island 13085 | ||
Gm11550 | 3 | 698 | - | pseudogene | predicted gene 11550 | |
Cpgi13086 | 3 | 581 | CpG island | CpG island 13086 | ||
Tssr28873 | 3 | 77 | + | TSS region | transcription start site region 28873 | |
Exosc9 | 3 | 13121 | + | protein coding gene | exosome component 9 | |
Ccna2 | 3 | 7285 | - | protein coding gene | cyclin A2 | |
Tssr33034 | 3 | 5 | - | TSS region | transcription start site region 33034 | |
D3Nds36 | 3 | 211 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 36 | ||
Tssr33035 | 3 | 24 | - | TSS region | transcription start site region 33035 | |
Cpgi13087 | 3 | 1166 | CpG island | CpG island 13087 | ||
Tssr33036 | 3 | 13 | - | TSS region | transcription start site region 33036 | |
Tssr33037 | 3 | 51 | - | TSS region | transcription start site region 33037 | |
Bbs7 | 3 | 40335 | - | protein coding gene | Bardet-Biedl syndrome 7 (human) | |
Tssr33038 | 3 | 29 | - | TSS region | transcription start site region 33038 | |
Cpgi13088 | 3 | 554 | CpG island | CpG island 13088 | ||
Tssr33039 | 3 | 28 | - | TSS region | transcription start site region 33039 | |
Tssr33040 | 3 | 27 | - | TSS region | transcription start site region 33040 | |
Tssr33041 | 3 | 11 | - | TSS region | transcription start site region 33041 | |
Tssr33042 | 3 | 10 | - | TSS region | transcription start site region 33042 | |
Tssr28874 | 3 | 4 | + | TSS region | transcription start site region 28874 | |
Tssr33043 | 3 | 11 | - | TSS region | transcription start site region 33043 | |
Tssr28875 | 3 | 9 | + | TSS region | transcription start site region 28875 | |
Trpc3 | 3 | 69685 | - | protein coding gene | transient receptor potential cation channel, subfamily C, member 3 | |
Cpgi13089 | 3 | 313 | CpG island | CpG island 13089 | ||
Gm35856 | 3 | 946 | - | lncRNA gene | predicted gene, 35856 | |
Cpgi13090 | 3 | 890 | CpG island | CpG island 13090 | ||
Cpgi13091 | 3 | 1656 | CpG island | CpG island 13091 | ||
Tssr33044 | 3 | 54 | - | TSS region | transcription start site region 33044 | |
Gm12377 | 3 | 251 | - | pseudogene | predicted gene 12377 | |
D3Nds65 | 3 | 151 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 65 | ||
D3Nds64 | 3 | 136 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 64 | ||
Gm12376 | 3 | 606 | - | pseudogene | predicted gene 12376 | |
Tssr28876 | 3 | 16 | + | TSS region | transcription start site region 28876 | |
Tssr28877 | 3 | 26 | + | TSS region | transcription start site region 28877 | |
Cpgi13092 | 3 | 808 | CpG island | CpG island 13092 | ||
Tssr28878 | 3 | 45 | + | TSS region | transcription start site region 28878 | |
4932438A13Rik | 3 | 189929 | + | protein coding gene | RIKEN cDNA 4932438A13 gene | |
Tssr28879 | 3 | 16 | + | TSS region | transcription start site region 28879 | |
Tssr28880 | 3 | 11 | + | TSS region | transcription start site region 28880 | |
Tssr28881 | 3 | 11 | + | TSS region | transcription start site region 28881 | |
Tssr28882 | 3 | 30 | + | TSS region | transcription start site region 28882 | |
Tssr28883 | 3 | 6 | + | TSS region | transcription start site region 28883 | |
D3Nds47 | 3 | 166 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 47 | ||
Gm12531 | 3 | 7820 | - | antisense lncRNA gene | predicted gene 12531 | |
D3Nds50 | 3 | 50 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 50 | ||
Tssr28884 | 3 | 19 | + | TSS region | transcription start site region 28884 | |
Tssr28885 | 3 | 7 | + | TSS region | transcription start site region 28885 | |
Cpgi13093 | 3 | 757 | CpG island | CpG island 13093 | ||
Adad1 | 3 | 58403 | + | protein coding gene | adenosine deaminase domain containing 1 (testis specific) | |
Tssr28886 | 3 | 4 | + | TSS region | transcription start site region 28886 | |
Tssr28887 | 3 | 8 | + | TSS region | transcription start site region 28887 | |
Tssr28888 | 3 | 28 | + | TSS region | transcription start site region 28888 | |
Tssr28889 | 3 | 23 | + | TSS region | transcription start site region 28889 | |
Tssr28890 | 3 | 2 | + | TSS region | transcription start site region 28890 | |
Tssr28891 | 3 | 11 | + | TSS region | transcription start site region 28891 | |
Gm12582 | 3 | 696 | + | pseudogene | predicted gene 12582 | |
Gm12583 | 3 | 852 | + | pseudogene | predicted gene 12583 | |
Gm12584 | 3 | 1104 | + | pseudogene | predicted gene 12584 | |
D3Nds6 | 3 | 140 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 6 | ||
Ssial2 | 3 | 5241 | QTL | susceptibility to sialadenitis 2 | ||
Il2 | 3 | 5241 | - | protein coding gene | interleukin 2 | |
D3Mit21 | 3 | 230 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 21 | ||
Aod2 | 3 | 31684020 | QTL | autoimmune ovarian dysgenesis 2 | ||
D3Nds27 | 3 | 128 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 27 | ||
Tssr33045 | 3 | 75 | - | TSS region | transcription start site region 33045 | |
Tssr33046 | 3 | 11 | - | TSS region | transcription start site region 33046 | |
Tssr33047 | 3 | 5 | - | TSS region | transcription start site region 33047 | |
Tssr33048 | 3 | 26 | - | TSS region | transcription start site region 33048 | |
Gm36000 | 3 | 6922 | - | lncRNA gene | predicted gene, 36000 | |
Tssr33049 | 3 | 8 | - | TSS region | transcription start site region 33049 | |
Gm12532 | 3 | 5708 | + | lincRNA gene | predicted gene 12532 | |
Il21 | 3 | 9877 | - | protein coding gene | interleukin 21 | |
Gm36168 | 3 | 1734 | + | lncRNA gene | predicted gene, 36168 | |
Gm12534 | 3 | 1136 | + | antisense lncRNA gene | predicted gene 12534 | |
Tssr28892 | 3 | 11 | + | TSS region | transcription start site region 28892 | |
Tssr33050 | 3 | 4 | - | TSS region | transcription start site region 33050 | |
Gm43822 | 3 | 475 | + | unclassified gene | predicted gene 43822 | |
Gm24169 | 3 | 109 | - | miRNA gene | predicted gene, 24169 | |
Cpgi13094 | 3 | 190 | CpG island | CpG island 13094 | ||
Tssr28893 | 3 | 10 | + | TSS region | transcription start site region 28893 | |
D3Nds56 | 3 | 152 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 56 | ||
Cetn4 | 3 | 3819 | - | protein coding gene | centrin 4 | |
Cpgi13095 | 3 | 894 | CpG island | CpG island 13095 | ||
Tssr33051 | 3 | 47 | - | TSS region | transcription start site region 33051 | |
Tssr28894 | 3 | 61 | + | TSS region | transcription start site region 28894 | |
Gm43439 | 3 | 92347 | + | unclassified non-coding RNA gene | predicted gene 43439 | |
Bbs12 | 3 | 8899 | + | protein coding gene | Bardet-Biedl syndrome 12 (human) | |
Gm12540 | 3 | 318 | + | pseudogene | predicted gene 12540 | |
Fgf2os | 3 | 14408 | - | antisense lncRNA gene | fibroblast growth factor 2, opposite strand | |
Gm43488 | 3 | 2503 | + | unclassified gene | predicted gene 43488 | |
Cpgi13096 | 3 | 1222 | CpG island | CpG island 13096 | ||
Fgf2 | 3 | 56416 | + | protein coding gene | fibroblast growth factor 2 | |
Tssr28895 | 3 | 8 | + | TSS region | transcription start site region 28895 | |
Tssr28896 | 3 | 71 | + | TSS region | transcription start site region 28896 | |
D3Nds51 | 3 | 274 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 51 | ||
Tssr28897 | 3 | 1 | + | TSS region | transcription start site region 28897 | |
Tssr28898 | 3 | 14 | + | TSS region | transcription start site region 28898 | |
D3Nds34 | 3 | 196 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 34 | ||
Gm42923 | 3 | 2895 | - | unclassified gene | predicted gene 42923 | |
Nudt6 | 3 | 15204 | - | protein coding gene | nudix (nucleoside diphosphate linked moiety X)-type motif 6 | |
Cpgi13097 | 3 | 2105 | CpG island | CpG island 13097 | ||
Tssr33052 | 3 | 32 | - | TSS region | transcription start site region 33052 | |
Spata5 | 3 | 159146 | + | protein coding gene | spermatogenesis associated 5 | |
Tssr28899 | 3 | 15 | + | TSS region | transcription start site region 28899 | |
Tssr28900 | 3 | 62 | + | TSS region | transcription start site region 28900 | |
Tssr28901 | 3 | 15 | + | TSS region | transcription start site region 28901 | |
Tssr28902 | 3 | 9 | + | TSS region | transcription start site region 28902 | |
D3Nds46 | 3 | 116 | DNA segment | DNA segment, Chr 3, Nuffield Department of Surgery 46 | ||
Tssr28903 | 3 | 19 | + | TSS region | transcription start site region 28903 | |
Tssr28904 | 3 | 24 | + | TSS region | transcription start site region 28904 | |
Cpgi13098 | 3 | 156 | CpG island | CpG island 13098 | ||
Tssr28905 | 3 | 23 | + | TSS region | transcription start site region 28905 | |
Tssr28906 | 3 | 11 | + | TSS region | transcription start site region 28906 | |
Gm43484 | 3 | 5965 | + | unclassified gene | predicted gene 43484 | |
Gm36412 | 3 | 60513 | - | lncRNA gene | predicted gene, 36412 | |
D3Ertd740e | 3 | 227 | DNA segment | DNA segment, Chr 3, ERATO Doi 740, expressed | ||
Gm12564 | 3 | 320 | - | pseudogene | predicted gene 12564 | |
Gm12565 | 3 | 645 | - | pseudogene | predicted gene 12565 | |
Tssr33053 | 3 | 7 | - | TSS region | transcription start site region 33053 | |
Cpgi13099 | 3 | 235 | CpG island | CpG island 13099 | ||
Tssr28907 | 3 | 16 | + | TSS region | transcription start site region 28907 | |
4930594O21Rik | 3 | 1363 | + | lincRNA gene | RIKEN cDNA 4930594O21 gene | |
Gm42922 | 3 | 2077 | - | unclassified gene | predicted gene 42922 | |
Tssr28908 | 3 | 29 | + | TSS region | transcription start site region 28908 | |
Cpgi13100 | 3 | 1735 | CpG island | CpG island 13100 | ||
Tssr28909 | 3 | 7 | + | TSS region | transcription start site region 28909 | |
Tssr28910 | 3 | 15 | + | TSS region | transcription start site region 28910 | |
Tssr28911 | 3 | 19 | + | TSS region | transcription start site region 28911 | |
Spry1 | 3 | 4651 | + | protein coding gene | sprouty RTK signaling antagonist 1 | |
Tssr28912 | 3 | 1 | + | TSS region | transcription start site region 28912 | |
Tssr28913 | 3 | 14 | + | TSS region | transcription start site region 28913 | |
Tssr28914 | 3 | 21 | + | TSS region | transcription start site region 28914 | |
Tssr28915 | 3 | 9 | + | TSS region | transcription start site region 28915 | |
Tssr28916 | 3 | 12 | + | TSS region | transcription start site region 28916 | |
Gm43820 | 3 | 3345 | + | unclassified gene | predicted gene 43820 | |
Tssr28917 | 3 | 4 | + | TSS region | transcription start site region 28917 | |
Gm46799 | 3 | 3837 | - | lncRNA gene | predicted gene, 46799 | |
Tssr28918 | 3 | 17 | + | TSS region | transcription start site region 28918 | |
Tssr28919 | 3 | 28 | + | TSS region | transcription start site region 28919 | |
Tssr28920 | 3 | 13 | + | TSS region | transcription start site region 28920 | |
Tssr28921 | 3 | 9 | + | TSS region | transcription start site region 28921 | |
Tssr28922 | 3 | 19 | + | TSS region | transcription start site region 28922 | |
Cpgi13101 | 3 | 333 | CpG island | CpG island 13101 | ||
Tssr33054 | 3 | 6 | - | TSS region | transcription start site region 33054 | |
Gm42211 | 3 | 4392 | - | lncRNA gene | predicted gene, 42211 | |
Tssr33055 | 3 | 2 | - | TSS region | transcription start site region 33055 | |
Gm43414 | 3 | 3187 | + | unclassified gene | predicted gene 43414 | |
Gm5148 | 3 | 10170 | - | protein coding gene | predicted gene 5148 | |
Tssr28923 | 3 | 1 | + | TSS region | transcription start site region 28923 | |
Rps23-ps1 | 3 | 424 | + | pseudogene | ribosomal protein S23, pseudogene 1 | |
Gm36620 | 3 | 17092 | + | lncRNA gene | predicted gene, 36620 | |
Cpgi13102 | 3 | 408 | CpG island | CpG island 13102 | ||
Tssr33056 | 3 | 17 | - | TSS region | transcription start site region 33056 | |
Tssr28924 | 3 | 12 | + | TSS region | transcription start site region 28924 | |
Rpl31-ps15 | 3 | 374 | + | pseudogene | ribosomal protein L31, pseudogene 15 | |
Gm42210 | 3 | 21197 | + | lncRNA gene | predicted gene, 42210 | |
Tssr28925 | 3 | 8 | + | TSS region | transcription start site region 28925 | |
Gm42921 | 3 | 6260 | + | lincRNA gene | predicted gene 42921 | |
Tssr28926 | 3 | 18 | + | TSS region | transcription start site region 28926 | |
Sles3 | 3 | -106526709 | QTL | systemic lupus erythmatosus suppressor 3 |