Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:35859312-36100678

44 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
1110021P09Rik	3	35861622 to 35862120	498		unclassified gene	RIKEN cDNA 1110021P09 gene
Tssr28855	3	35863802 to 35863805	3	+	TSS region	transcription start site region 28855
Gm7741	3	35863877 to 35864865	988	+	pseudogene	predicted gene 7741
Gm20595	3	35875646 to 35883349	7703	-	pseudogene	predicted gene, 20595
Dcun1d1	3	35892105 to 35937440	45335	-	protein coding gene	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
Tssr33003	3	35925614 to 35925617	3	-	TSS region	transcription start site region 33003
Cpgi13077	3	35931990 to 35933732	1742		CpG island	CpG island 13077
Tssr33004	3	35932512 to 35932532	20	-	TSS region	transcription start site region 33004
Tssr33005	3	35932570 to 35932596	26	-	TSS region	transcription start site region 33005
Tssr33006	3	35932836 to 35932854	18	-	TSS region	transcription start site region 33006
Tssr33007	3	35932858 to 35932904	46	-	TSS region	transcription start site region 33007
Tssr28856	3	35932883 to 35932915	32	+	TSS region	transcription start site region 28856
Gm15952	3	35933049 to 35955642	22593	+	antisense lncRNA gene	predicted gene 15952
Tssr33008	3	35933051 to 35933077	26	-	TSS region	transcription start site region 33008
Tssr33009	3	35933095 to 35933100	5	-	TSS region	transcription start site region 33009
Tssr33010	3	35933271 to 35933287	16	-	TSS region	transcription start site region 33010
Tssr860	3	35937386 to 35937390	4	-	TSS region	transcription start site region 860
Tssr33011	3	35937403 to 35937451	48	-	TSS region	transcription start site region 33011
Tssr861	3	35937474 to 35937479	5	-	TSS region	transcription start site region 861
Tssr28857	3	35937542 to 35937553	11	+	TSS region	transcription start site region 28857
8430422M14Rik	3	35955436 to 35956257	821	-	unclassified gene	RIKEN cDNA 8430422M14 gene
Mccc1	3	35959312 to 36000678	41366	-	protein coding gene	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
Gm43080	3	35969384 to 35972026	2642	-	unclassified gene	predicted gene 43080
B230207O21Rik	3	35973771 to 35974091	320	+	pseudogene	RIKEN cDNA B230207O21 gene
Mccc1os	3	35999913 to 36008828	8915	+	antisense lncRNA gene	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand
Cpgi13078	3	36000237 to 36000759	522		CpG island	CpG island 13078
Tssr28858	3	36000417 to 36000440	23	+	TSS region	transcription start site region 28858
Tssr33012	3	36000564 to 36000608	44	-	TSS region	transcription start site region 33012
Tssr33013	3	36000617 to 36000647	30	-	TSS region	transcription start site region 33013
Tssr33014	3	36000650 to 36000660	10	-	TSS region	transcription start site region 33014
Tssr33015	3	36000662 to 36000682	20	-	TSS region	transcription start site region 33015
Ccdc144b	3	36007247 to 36053547	46300	-	protein coding gene	coiled-coil domain containing 144B
Tssr33016	3	36053491 to 36053501	10	-	TSS region	transcription start site region 33016
Tssr33017	3	36053504 to 36053510	6	-	TSS region	transcription start site region 33017
Tssr33018	3	36053512 to 36053531	19	-	TSS region	transcription start site region 33018
Cpgi13079	3	36065868 to 36066519	651		CpG island	CpG island 13079
Acad9	3	36065984 to 36092857	26873	+	protein coding gene	acyl-Coenzyme A dehydrogenase family, member 9
Tssr28859	3	36065984 to 36066004	20	+	TSS region	transcription start site region 28859
Tssr28860	3	36066046 to 36066063	17	+	TSS region	transcription start site region 28860
Tssr28861	3	36066064 to 36066102	38	+	TSS region	transcription start site region 28861
Tssr28862	3	36066111 to 36066118	7	+	TSS region	transcription start site region 28862
Tssr28863	3	36075912 to 36075915	3	+	TSS region	transcription start site region 28863
Gm43079	3	36088859 to 36091446	2587	+	antisense lncRNA gene	predicted gene 43079
Gm43205	3	36097177 to 36099144	1967	+	unclassified gene	predicted gene 43205